Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_P16
         (942 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       29   0.27 
EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    28   0.47 
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    27   0.62 
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    24   7.7  

>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 28.7 bits (61), Expect = 0.27
 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
 Frame = -2

Query: 569 HPARKRHTIEQSLTTCFAPIPLEGRRTLSSV---CPLPPLCSEGPSC 438
           HP ++  T+ +   TC+    LE  RTLS     CP      E P C
Sbjct: 287 HPCKRACTLGRKPETCYYRFRLEWYRTLSKACYNCPYNATDCERPHC 333


>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 27.9 bits (59), Expect = 0.47
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -2

Query: 392 PGTRPPHRPSLFPAPICRSIAIYARVLPVLIFHV 291
           P   PP    + P P+C S   +AR+L +++  V
Sbjct: 127 PSWEPPGWQKVCPYPLCPSYRQFARILSIILIGV 160


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 27.5 bits (58), Expect = 0.62
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
 Frame = -2

Query: 446 PSCRAVSTQNGFLSLR--SWPGTRPPHRPSLFP 354
           PSCR+   +    S R  SWP +RP  +P   P
Sbjct: 269 PSCRSPPARRRSRSTRPTSWPRSRPTSKPKRLP 301


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 23.8 bits (49), Expect = 7.7
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +1

Query: 268  RRTPPNQKT*KINTGKTLAYIAIDRQIGAGNREGRCGGLVPGQERRERNP 417
            RR PP+ +T ++   +   Y+ +  Q     R+G  G +  G++RR R P
Sbjct: 1114 RRLPPSPRTTEMRRRRR-NYMQL--QYRRRRRDGELGDVPQGRQRRGRIP 1160


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 833,709
Number of Sequences: 2352
Number of extensions: 16276
Number of successful extensions: 50
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 102949299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)