Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_P14
(896 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_1083 + 11096520-11096664,11097543-11097592,11097682-110977... 101 6e-22
04_04_1169 - 31446291-31446395,31446789-31446918,31447047-314471... 36 0.033
09_06_0016 - 20240358-20240797,20241040-20241131,20241132-202412... 29 5.0
06_03_0046 - 15852653-15854560 29 5.0
04_03_0867 - 20414999-20415160,20415255-20415384,20415515-204157... 29 5.0
11_04_0351 + 16666398-16666532,16666911-16667048,16667398-166683... 29 6.6
07_01_0688 - 5211484-5211626,5211730-5211826,5211930-5212105,521... 28 8.8
>08_01_1083 +
11096520-11096664,11097543-11097592,11097682-11097754,
11099122-11099201,11099354-11099505,11100653-11100812,
11100886-11100933,11101118-11101198,11101517-11101597
Length = 289
Score = 101 bits (243), Expect = 6e-22
Identities = 46/117 (39%), Positives = 74/117 (63%)
Frame = +3
Query: 249 EEAVDCYLRAANLFKMAKKWPQAGQAFCNAAQLHLKAGVRHDAATNFVDASNCYKKCDAN 428
E+A D + + AN FK+AK W +A Q + A HLK +H+AA+ +V+A+NCYKK
Sbjct: 30 EDAADLFDKGANSFKLAKNWSRAAQVYIKIANCHLKGDSKHEAASAYVEAANCYKKFSPQ 89
Query: 429 EAVSCLLKAIEIYTDMGRFTVAAKQHQNIAELYETECVDLARAMQHYEQAADYFRGE 599
EA L +A++++ ++GR +AA+ ++I E+Y E DL +A + E++AD F E
Sbjct: 90 EAAQALNQAVDLFLEIGRLNMAARYCKDIGEIYHQE-QDLEKASDYLEKSADLFDSE 145
Score = 51.6 bits (118), Expect = 8e-07
Identities = 23/54 (42%), Positives = 36/54 (66%)
Frame = +2
Query: 605 TSSANKCMLKLAQYAAQLEHYDKAIQIYEQIAKSSLDNSLLKYSAKEXMFRAAL 766
+S +N K+A+ AAQLE Y KA +I+E IA+ ++N+LLKYS + + A +
Sbjct: 148 SSQSNSIKQKVAEIAAQLEQYQKANEIFEAIARQQINNNLLKYSVRGILLNAGI 201
>04_04_1169 -
31446291-31446395,31446789-31446918,31447047-31447126,
31447396-31447474,31448178-31448315,31448386-31448522
Length = 222
Score = 36.3 bits (80), Expect = 0.033
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +3
Query: 249 EEAVDCYLRAANLFKMAKKWPQAGQAFCNAAQLHLKAGVRHDAATNFVDASNCYKKCDA- 425
+EA+ Y A ++ + K A + AA L++K DAA F+ + KC+A
Sbjct: 54 DEAIKMYDEACSILEEDGKEQMAFDLYRAAASLYVKLEKYSDAAATFLRLGSAADKCNAI 113
Query: 426 NEAVSCLLKAIEIYTDMGRFTVAAKQHQNIAEL 524
N L AI IY F A K + + +E+
Sbjct: 114 NSQCKGYLSAIIIYLYAHDFQQAQKCYNDCSEV 146
>09_06_0016 -
20240358-20240797,20241040-20241131,20241132-20241250,
20241398-20241561,20241664-20241757,20242048-20242080,
20242361-20242478,20242712-20242812,20242882-20242962,
20243138-20243335,20243411-20243545,20243662-20243667,
20243727-20243805,20243845-20243896,20244328-20244388,
20244475-20244532,20245137-20245225,20246305-20246799
Length = 804
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -3
Query: 189 SPPRPLAASLFVSLSAISADLVKH*TLRIQN 97
SPP L+ SL +SLS IS + H T+R N
Sbjct: 79 SPPLSLSLSLSLSLSLISPQISLHATVRFAN 109
>06_03_0046 - 15852653-15854560
Length = 635
Score = 29.1 bits (62), Expect = 5.0
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3
Query: 744 SXCSEPPWCHLCV 782
S CSEP WCH C+
Sbjct: 240 SDCSEPVWCHSCL 252
>04_03_0867 -
20414999-20415160,20415255-20415384,20415515-20415702,
20415967-20416001,20416363-20416579,20416737-20416820,
20417609-20417875,20417954-20418061,20418163-20418249,
20418629-20419399
Length = 682
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = -2
Query: 496 AATVKRPISV*ISIAFRRQDTASLASHFL*QLEASTKLVAASWRTPAFKWSCAALQKAC 320
A T+ P + + +FR + TA+ S + + VA W+T W+CAA C
Sbjct: 91 ARTLALPATPASACSFRLRATAARDSPLPSLFDEAFPFVAVEWKTIVKGWACAAAAVYC 149
>11_04_0351 +
16666398-16666532,16666911-16667048,16667398-16668306,
16668383-16668511,16668774-16668996,16669085-16669231,
16669332-16669573,16669660-16669689,16669784-16669865,
16669968-16670128,16670775-16670898,16671206-16671414
Length = 842
Score = 28.7 bits (61), Expect = 6.6
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +3
Query: 264 CYLRAANLFKMAKKWPQAGQAFCNAAQLHLKAGV-RHDAATNFVDASNCYKKC-DANEAV 437
C A + K P +AF ++ L+ G+ +H+ A N V Y KC D A
Sbjct: 115 CACFVAKVLANRAKAPLEAKAFVRRTKV-LRDGIWKHEDAANLVPGDIIYLKCGDIVPAN 173
Query: 438 SCLLKAIEIYT 470
+C+L +I T
Sbjct: 174 ACVLNMAQIDT 184
>07_01_0688 -
5211484-5211626,5211730-5211826,5211930-5212105,
5212240-5212631,5212712-5212960,5213046-5213188,
5213283-5213402,5214491-5214835
Length = 554
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 101 CILSV*CLTKSAEMADNETKSDAANGRGGEKIKFIK 208
C+L + K A++ +N D ANG GG K++ IK
Sbjct: 204 CLLELVPKDKEADVINNRLIVDGANGIGGLKLEEIK 239
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,431,479
Number of Sequences: 37544
Number of extensions: 378283
Number of successful extensions: 1196
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1195
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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