Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_P13
         (919 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    27   0.27 
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           25   0.83 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    24   1.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   1.4  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   5.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.8  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 26.6 bits (56), Expect = 0.27
 Identities = 13/47 (27%), Positives = 20/47 (42%)
 Frame = +1

Query: 289 KHLVQCYNRGCGQAFDPNDNEKDECRHHPGHPVFHDAYKGWSCCNKK 429
           K++  C+  GCG+ +    + K   R H G   F      W  C K+
Sbjct: 312 KNIHSCHIPGCGKVYGKTSHLKAHLRWHTGERPF---VCNWLFCGKR 355


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 25.0 bits (52), Expect = 0.83
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +1

Query: 133 EHTYIHDTHLFSNLRPIILYEQC 201
           EH Y H+  ++ +++   +YE C
Sbjct: 36  EHNYTHNNEMYHSVKEEPIYESC 58


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = -3

Query: 221 YSNXGVIHCSYNMIGLKLENKCVSCMYVCSNKFCF*FRDKMTCQ 90
           Y N    H S   +G   E KCV+C        C+   DK TC+
Sbjct: 855 YVNGSEYHPSIVSLG---EYKCVTCKCENGKPTCWRECDKATCE 895


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = -1

Query: 439 NQHFSYYNMTS-PCKHRGILDVLDGG 365
           N  FS Y+  S PC++ G+  + DGG
Sbjct: 372 NCEFSGYDCDSNPCQNGGVCRISDGG 397


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +1

Query: 268 ITNMPEDKHLVQCYNRG 318
           + N+P DK+++Q +  G
Sbjct: 433 LENLPSDKYIIQIWTTG 449


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = -1

Query: 640 IQLCGFLRAPEVFQRVVFVTVDQQLELLLQ*YPFFP 533
           I LC FL      QRVV  T+   L   ++ YP  P
Sbjct: 6   ITLCAFLILTPTDQRVVTRTIPSFLRDDVERYPSGP 41


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,748
Number of Sequences: 336
Number of extensions: 4534
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25651384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)