Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_P13
         (919 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0092 + 722744-723459,723542-723711,723792-724885                 29   3.9  
08_02_1345 - 26286448-26286679,26287483-26288038,26288068-262883...    28   9.0  

>01_01_0092 + 722744-723459,723542-723711,723792-724885
          Length = 659

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = -1

Query: 754 SKCCGTNHQFLQXGSNXYISIFRDWSFLXL-YXAEIVS-MIQLCGFLRAP 611
           S   GT  QFL    N Y S  + W  L L +  EIV  +I LC F+ AP
Sbjct: 255 SAIIGTELQFLGCVINYYSSATQVWVTLVLVFAVEIVKCIIVLCRFILAP 304


>08_02_1345 -
           26286448-26286679,26287483-26288038,26288068-26288358,
           26288953-26290516
          Length = 880

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -3

Query: 233 PFCKYSNXGVIHCSYNMIGLKLENKCVSCMYVCSNKF 123
           PFC   +      + +++GL   N  V+C ++CS  F
Sbjct: 230 PFCTVHSSLHAESTKHLVGLVYHNPYVACCFLCSETF 266


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,100,957
Number of Sequences: 37544
Number of extensions: 417052
Number of successful extensions: 746
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)