Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_P10
         (878 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    31   0.046
AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    26   1.3  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    26   1.3  
AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          25   2.3  
AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450 CY...    25   2.3  
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    25   4.0  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 31.1 bits (67), Expect = 0.046
 Identities = 35/118 (29%), Positives = 46/118 (38%)
 Frame = +1

Query: 316 FPGLHGKPYADPEIGDPNFEPLWNSIDGNISRVSYNGPYQIVNGFPLNPLGRTGICGRGV 495
           FPG+ G        G P   P  + + G    V   G Y    GF   P GR G   RG+
Sbjct: 383 FPGVKGDKGTTGLPGIPG-PPCVDGLPGAAGPVGPRG-YDGEKGFKGEP-GRIG--ERGL 437

Query: 496 LGRWGPNHAADPIISRWKRLDNGNMAVGVNNKPILQFIAIKRGDTGEWAIPGGMVDPG 669
           +G  G      P+    ++ D G    G    P    +A  +GD GE   PG +  PG
Sbjct: 438 MGEKGDMGLTGPVGLSGRKGDRG--VPGSPGLPAT--VAAIKGDKGEPGFPGAIGRPG 491


>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +1

Query: 367 NFEP-LWNSIDGNISRVSYNGPYQIVNGFPLNPL 465
           NF P  W  ++ + S +    PY IVN F ++PL
Sbjct: 304 NFNPHKWMLVNFDCSAMWLKEPYWIVNAFNVDPL 337


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +1

Query: 367 NFEP-LWNSIDGNISRVSYNGPYQIVNGFPLNPL 465
           NF P  W  ++ + S +    PY IVN F ++PL
Sbjct: 335 NFNPHKWMLVNFDCSAMWLKEPYWIVNAFNVDPL 368


>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 5/52 (9%)
 Frame = +1

Query: 499 GRW-GPNHAADPIISR----WKRLDNGNMAVGVNNKPILQFIAIKRGDTGEW 639
           GRW G N A     SR    W R       + + ++ IL FIA    D G W
Sbjct: 76  GRWRGENVAVKIFSSREECSWSREAEIYQTIMLRHENILGFIAADNKDNGTW 127


>AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450
           CYPm3r5 protein.
          Length = 519

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +1

Query: 310 YTFPGLHGKPYADPEIGDPNFEPLWNSI-DGNISRVSYNGPYQIVNGFP 453
           Y+F   +  PY +PE+   NF+ +  SI   ++S+  Y   Y+ V G P
Sbjct: 30  YSFWRSYHVPYVEPELPYGNFKEMGKSIHPAHLSQRFYE-QYKAVPGSP 77


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +1

Query: 412 VSYNGPYQIVNGFPLNPLGRTGICG 486
           V Y+G +Q+ + +  +P GR  +CG
Sbjct: 548 VQYHGMFQLSDEYWCSPPGRGWVCG 572


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 838,031
Number of Sequences: 2352
Number of extensions: 16690
Number of successful extensions: 38
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94266828
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)