Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_P08
         (984 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      98   9e-23
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          86   4e-19
AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.      36   7e-04
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    25   1.4  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   5.6  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   9.8  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   9.8  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 98.3 bits (234), Expect = 9e-23
 Identities = 41/91 (45%), Positives = 62/91 (68%)
 Frame = +2

Query: 209 MASDEQFSLCWNNFHANMSAGFHGLLSRGXLVDVTLAAEGRLLQAHKLVLSVCSPYFQEM 388
           M   + F L WNN+ +++++ F  L      VDVTLA +GR L+AH++VLS CSPYF+E+
Sbjct: 1   MVDTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACDGRSLKAHRVVLSACSPYFREL 60

Query: 389 FKMNPTQHPIVFLKDVSHSALRDLLQFMYQG 481
            K  P +HP++ L+DV+ S L  L++F+Y G
Sbjct: 61  LKSTPCKHPVIVLQDVAFSDLHALVEFIYHG 91



 Score = 37.1 bits (82), Expect = 2e-04
 Identities = 17/26 (65%), Positives = 20/26 (76%)
 Frame = +3

Query: 480 GEVNVKQEELASFISTAEQLQVKGLT 557
           GEVNV Q  L+SF+ TAE L+V GLT
Sbjct: 91  GEVNVHQRSLSSFLKTAEVLRVSGLT 116


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 86.2 bits (204), Expect = 4e-19
 Identities = 39/88 (44%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
 Frame = +2

Query: 221 EQFSLCWNNFHANMSAGFHGLLSRGXLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMN 400
           + + L WNN+ +NM++ FH LL     VDVTLA     L+AHK+VLS CS YFQ++   N
Sbjct: 9   QHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSN 68

Query: 401 PTQHP-IVFLKDVSHSALRDLLQFMYQG 481
           P +HP I+  +DV  + L+ +++F+Y+G
Sbjct: 69  PCKHPTIIMPQDVCFNDLKFIIEFVYRG 96



 Score = 35.5 bits (78), Expect = 7e-04
 Identities = 14/26 (53%), Positives = 21/26 (80%)
 Frame = +3

Query: 477 KGEVNVKQEELASFISTAEQLQVKGL 554
           +GE++V Q EL S + TA+QL++KGL
Sbjct: 95  RGEIDVSQAELQSLLKTADQLKIKGL 120


>AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.
          Length = 39

 Score = 35.5 bits (78), Expect = 7e-04
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +2

Query: 209 MASDEQFSLCWNNFHANMSAGFHGLLSRGXLVDVTLAAE 325
           M   + F L WNN+ +++++ F  L      VDVTLA E
Sbjct: 1   MVDTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACE 39


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -3

Query: 577 LSSF*LPVKPLT*SCSAVLINDANSSCLTLTSPLIHKL 464
           LSS      P+T + S ++ N  NS+C    SP   KL
Sbjct: 323 LSSSTTTTSPMTSTKSTIVRNHLNSTCSVTNSPHQKKL 360


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +2

Query: 185 VPRRVVAIMASDEQFSLCWNNFHANMSAGFHGLLSRGXLVDVTL 316
           V R +VA++ +   F +CW  FHA      +   S+    DV +
Sbjct: 283 VIRMLVAVVVA---FFICWAPFHAQRLLAVYAQNSKDKPEDVLI 323


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 186 FHVESSLSWRRTNNFHY 236
           +   +S SWR TNN  Y
Sbjct: 211 YDFRNSRSWRITNNLFY 227


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 8/11 (72%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = -3

Query: 640 CLCCDDL-GPG 611
           C CCD+L GPG
Sbjct: 13  CWCCDNLGGPG 23


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,239
Number of Sequences: 438
Number of extensions: 3271
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 32532591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)