Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_P07
         (958 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          27   0.84 
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   5.9  

>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 27.1 bits (57), Expect = 0.84
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +2

Query: 734  PXGXXXXPXFPGFPXXPXTPXGL 802
            P G    P  P FP  P TP GL
Sbjct: 1104 PMGGSPRPETPAFPVTPRTPYGL 1126


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.2 bits (50), Expect = 5.9
 Identities = 15/56 (26%), Positives = 16/56 (28%)
 Frame = -2

Query: 894 KGXXXFPGXXXXXXXXXXXXQXGXKRXLRGPNPXGVXGXXGXPGXXGKXXXPXGGG 727
           KG    PG              G    +  P P G  G  G PG  G    P   G
Sbjct: 446 KGGQGVPGRPGPEGMPGDKGDKGESGSVGMPGPQGPRGYPGQPGPEGLRGEPGQPG 501



 Score = 23.8 bits (49), Expect = 7.8
 Identities = 17/64 (26%), Positives = 20/64 (31%), Gaps = 1/64 (1%)
 Frame = -2

Query: 915 GXKGVPX-KGXXXFPGXXXXXXXXXXXXQXGXKRXLRGPNPXGVXGXXGXPGXXGKXXXP 739
           G  G+P  KG    P             + G       P P G  G  G PG  G+   P
Sbjct: 202 GYAGIPGTKGEKGEPARHPENYNKGQKGEPGNDGLEGLPGPQGEVGPRGFPGRPGEKGVP 261

Query: 738 XGGG 727
              G
Sbjct: 262 GTPG 265


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 451,867
Number of Sequences: 2352
Number of extensions: 5256
Number of successful extensions: 10
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 105016554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)