Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_P07
(958 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 32 0.53
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 32 0.53
AL032634-3|CAE45092.1| 412|Caenorhabditis elegans Hypothetical ... 30 2.8
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.8
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.8
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 29 3.7
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 29 3.7
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 3.7
Z73969-6|CAA98236.1| 295|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z68113-2|CAA92149.2| 327|Caenorhabditis elegans Hypothetical pr... 29 4.9
U33919-1|AAA96505.1| 327|Caenorhabditis elegans MEC-5 precursor... 29 4.9
U33918-1|AAA96504.1| 327|Caenorhabditis elegans MEC-5 protein. 29 4.9
Z49938-2|CAA90187.1| 306|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z70271-3|CAA94234.1| 358|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 28 8.6
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 28 8.6
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 28 8.6
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 28 8.6
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 28 8.6
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 8.6
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 8.6
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 28 8.6
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 28 8.6
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 28 8.6
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 28 8.6
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 8.6
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 32.3 bits (70), Expect = 0.53
Identities = 19/68 (27%), Positives = 21/68 (30%)
Frame = -2
Query: 915 GXKGVPXKGXXXFPGXXXXXXXXXXXXQXGXKRXLRGPNPXGVXGXXGXPGXXGKXXXPX 736
G G P G PG Q G GP G G G PG G+ P
Sbjct: 198 GRNGEPQPGSPGEPGRPGQPGSRGPAGQPGKDGAQGGPGEKGANGEPGQPGRDGQPGRPG 257
Query: 735 GGGKXXXP 712
G+ P
Sbjct: 258 QPGRDGHP 265
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/75 (33%), Positives = 25/75 (33%)
Frame = -2
Query: 828 GXKRXLRGPNPXGVXGXXGXPGXXGKXXXPXGGGKXXXPXXFXGFRXXGGEXAPNXWTRF 649
G K L P P G G G G G P GGK P G GE P
Sbjct: 153 GNKGPLGPPGPPGPEGPNGTAGNKGPAGPPGPGGK-PGPAGPPGENGRNGEPQPG----- 206
Query: 648 XELGAPKXGXXPGSR 604
G P PGSR
Sbjct: 207 -SPGEPGRPGQPGSR 220
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 32.3 bits (70), Expect = 0.53
Identities = 20/54 (37%), Positives = 20/54 (37%)
Frame = -2
Query: 828 GXKRXLRGPNPXGVXGXXGXPGXXGKXXXPXGGGKXXXPXXFXGFRXXGGEXAP 667
G K L P P G G G PG G P GGK P G GE P
Sbjct: 155 GNKGPLGPPGPPGPEGPNGEPGNKGPAGPPGPGGK-PGPAGPPGENGNNGEPQP 207
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/68 (26%), Positives = 20/68 (29%)
Frame = -2
Query: 915 GXKGVPXKGXXXFPGXXXXXXXXXXXXQXGXKRXLRGPNPXGVXGXXGXPGXXGKXXXPX 736
G G P G PG + G G G G G PG G+ P
Sbjct: 200 GNNGEPQPGAPGEPGQPGQPGQRGPAGEPGKDGSPGGQGEKGASGEPGQPGRDGQPGHPG 259
Query: 735 GGGKXXXP 712
GK P
Sbjct: 260 QPGKDGRP 267
>AL032634-3|CAE45092.1| 412|Caenorhabditis elegans Hypothetical
protein Y39G8C.4 protein.
Length = 412
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/68 (25%), Positives = 21/68 (30%)
Frame = -2
Query: 915 GXKGVPXKGXXXFPGXXXXXXXXXXXXQXGXKRXLRGPNPXGVXGXXGXPGXXGKXXXPX 736
G +G K FPG G + + P G+ G G PG G P
Sbjct: 202 GQRGENAKSYRNFPGPPGPPGPVGPPGDSGERGNIHEGGPPGIVGGSGAPGVHGIPGPPG 261
Query: 735 GGGKXXXP 712
G P
Sbjct: 262 APGLPGDP 269
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 2.8
Identities = 20/73 (27%), Positives = 21/73 (28%)
Frame = +2
Query: 611 PGXXPXFGAPNSXXRVHXFGAXSPPXXLKPXKXXGXXXFPPPXGXXXXPXFPGFPXXPXT 790
P P S G+ PP P PPP G P G P P
Sbjct: 243 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 302
Query: 791 PXGLGPRRXLLXP 829
P G P L P
Sbjct: 303 PRGSPPTGSLPPP 315
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 2.8
Identities = 20/73 (27%), Positives = 21/73 (28%)
Frame = +2
Query: 611 PGXXPXFGAPNSXXRVHXFGAXSPPXXLKPXKXXGXXXFPPPXGXXXXPXFPGFPXXPXT 790
P P S G+ PP P PPP G P G P P
Sbjct: 264 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 323
Query: 791 PXGLGPRRXLLXP 829
P G P L P
Sbjct: 324 PRGSPPTGSLPPP 336
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 2.8
Identities = 20/73 (27%), Positives = 21/73 (28%)
Frame = +2
Query: 611 PGXXPXFGAPNSXXRVHXFGAXSPPXXLKPXKXXGXXXFPPPXGXXXXPXFPGFPXXPXT 790
P P S G+ PP P PPP G P G P P
Sbjct: 249 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 308
Query: 791 PXGLGPRRXLLXP 829
P G P L P
Sbjct: 309 PRGSPPTGSLPPP 321
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -2
Query: 807 GPNPXGVXGXXGXPGXXGKXXXPXGGGK 724
GP P G G G PG G+ P G G+
Sbjct: 196 GPGPAGPPGPAGPPGNDGQPGQPGGPGQ 223
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -2
Query: 804 PNPXGVXGXXGXPGXXGKXXXPXGGGKXXXP 712
P P G G G PG G P G G P
Sbjct: 173 PGPDGTPGEPGGPGPAGSPAGPSGPGPAGPP 203
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/58 (31%), Positives = 20/58 (34%)
Frame = -2
Query: 804 PNPXGVXGXXGXPGXXGKXXXPXGGGKXXXPXXFXGFRXXGGEXAPNXWTRFXELGAP 631
P P G G G PG GK P GG P GG P + + G P
Sbjct: 160 PGPAGEPGHDGAPGAPGKPGAPGVGGGSGAPGAPGPKGAPGGPGQPGRDGQPGQAGQP 217
Score = 28.3 bits (60), Expect = 8.6
Identities = 24/78 (30%), Positives = 25/78 (32%), Gaps = 2/78 (2%)
Frame = -2
Query: 939 AXGXXFXXGXKGVPX-KGXXXFPGXXXXXXXXXXXXQXGXKRXLRG-PNPXGVXGXXGXP 766
A G G G P KG PG Q G G P P G G G P
Sbjct: 180 APGVGGGSGAPGAPGPKGAPGGPGQPGRDGQPGQAGQPGSSSSEPGQPGPNGQPGPRGPP 239
Query: 765 GXXGKXXXPXGGGKXXXP 712
G G P G G+ P
Sbjct: 240 GQAGS---PGGNGQPGGP 254
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 29.5 bits (63), Expect = 3.7
Identities = 23/67 (34%), Positives = 23/67 (34%), Gaps = 1/67 (1%)
Frame = -2
Query: 807 GP-NPXGVXGXXGXPGXXGKXXXPXGGGKXXXPXXFXGFRXXGGEXAPNXWTRFXELGAP 631
GP NP G G PG P GG P G GG P F GAP
Sbjct: 408 GPFNPSGAPPSGGPPGPFNPSGAPPSGG-PPGPFNPSGAPPSGGPPGP-----FNPSGAP 461
Query: 630 KXGXXPG 610
G PG
Sbjct: 462 PSGGPPG 468
Score = 29.5 bits (63), Expect = 3.7
Identities = 23/67 (34%), Positives = 23/67 (34%), Gaps = 1/67 (1%)
Frame = -2
Query: 807 GP-NPXGVXGXXGXPGXXGKXXXPXGGGKXXXPXXFXGFRXXGGEXAPNXWTRFXELGAP 631
GP NP G G PG P GG P G GG P F GAP
Sbjct: 453 GPFNPSGAPPSGGPPGPFNPSGAPPSGG-PPGPFDPSGAPPSGGPPGP-----FNPSGAP 506
Query: 630 KXGXXPG 610
G PG
Sbjct: 507 PSGGPPG 513
Score = 29.1 bits (62), Expect = 4.9
Identities = 23/67 (34%), Positives = 23/67 (34%), Gaps = 1/67 (1%)
Frame = -2
Query: 807 GP-NPXGVXGXXGXPGXXGKXXXPXGGGKXXXPXXFXGFRXXGGEXAPNXWTRFXELGAP 631
GP NP G G PG P GG P G GG P F GAP
Sbjct: 228 GPFNPSGAPPSGGPPGPFDPSGAPPSGG-PPGPFNPSGAPPSGGPPGP-----FDPSGAP 281
Query: 630 KXGXXPG 610
G PG
Sbjct: 282 PSGGPPG 288
Score = 29.1 bits (62), Expect = 4.9
Identities = 23/67 (34%), Positives = 23/67 (34%), Gaps = 1/67 (1%)
Frame = -2
Query: 807 GP-NPXGVXGXXGXPGXXGKXXXPXGGGKXXXPXXFXGFRXXGGEXAPNXWTRFXELGAP 631
GP NP G G PG P GG P G GG P F GAP
Sbjct: 318 GPFNPSGAPPSGGPPGPFDPSGAPPSGG-PPGPFNPSGAPPSGGPPGP-----FDPSGAP 371
Query: 630 KXGXXPG 610
G PG
Sbjct: 372 PSGGPPG 378
>Z73969-6|CAA98236.1| 295|Caenorhabditis elegans Hypothetical
protein C12D8.8 protein.
Length = 295
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/65 (30%), Positives = 22/65 (33%), Gaps = 2/65 (3%)
Frame = -2
Query: 798 PXGVXGXXGXPGXXGKXXXPXGGGKXXXP--XXFXGFRXXGGEXAPNXWTRFXELGAPKX 625
P G G G PG G+ P GK P G R G AP + G P
Sbjct: 177 PRGNDGFPGLPGPPGENGQPGQSGKDGQPGRNGADGKRGYGAPGAPGAQGKPGPSGPPGI 236
Query: 624 GXXPG 610
PG
Sbjct: 237 DGYPG 241
>Z68113-2|CAA92149.2| 327|Caenorhabditis elegans Hypothetical
protein E03G2.3 protein.
Length = 327
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/69 (27%), Positives = 22/69 (31%), Gaps = 1/69 (1%)
Frame = -2
Query: 915 GXKGVPX-KGXXXFPGXXXXXXXXXXXXQXGXKRXLRGPNPXGVXGXXGXPGXXGKXXXP 739
G G+P KG PG G K P G+ G G PG G+ P
Sbjct: 124 GNSGIPGLKGDTGIPGKVGEPGSTGQPGSKGEKGMEGLPGTNGLPGAPGWPGSKGEDGLP 183
Query: 738 XGGGKXXXP 712
G P
Sbjct: 184 GRPGSPGFP 192
>U33919-1|AAA96505.1| 327|Caenorhabditis elegans MEC-5 precursor
protein.
Length = 327
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/69 (27%), Positives = 22/69 (31%), Gaps = 1/69 (1%)
Frame = -2
Query: 915 GXKGVPX-KGXXXFPGXXXXXXXXXXXXQXGXKRXLRGPNPXGVXGXXGXPGXXGKXXXP 739
G G+P KG PG G K P G+ G G PG G+ P
Sbjct: 124 GNSGIPGLKGDTGIPGKVGEPGSTGQPGSKGEKGMEGLPGTNGLPGAPGWPGSKGEDGLP 183
Query: 738 XGGGKXXXP 712
G P
Sbjct: 184 GRPGSPGFP 192
>U33918-1|AAA96504.1| 327|Caenorhabditis elegans MEC-5 protein.
Length = 327
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/69 (27%), Positives = 22/69 (31%), Gaps = 1/69 (1%)
Frame = -2
Query: 915 GXKGVPX-KGXXXFPGXXXXXXXXXXXXQXGXKRXLRGPNPXGVXGXXGXPGXXGKXXXP 739
G G+P KG PG G K P G+ G G PG G+ P
Sbjct: 124 GNSGIPGLKGDTGIPGKVGEPGSTGQPGSKGEKGMEGLPGTNGLPGAPGWPGSKGEDGLP 183
Query: 738 XGGGKXXXP 712
G P
Sbjct: 184 GRPGSPGFP 192
>Z49938-2|CAA90187.1| 306|Caenorhabditis elegans Hypothetical
protein F38A3.1 protein.
Length = 306
Score = 28.7 bits (61), Expect = 6.5
Identities = 21/69 (30%), Positives = 23/69 (33%), Gaps = 1/69 (1%)
Frame = -2
Query: 915 GXKGVPXKGXXXFPGXXXXXXXXXXXXQXGXKRXLRG-PNPXGVXGXXGXPGXXGKXXXP 739
G G P G PG Q G R + G P P G G G PG G P
Sbjct: 195 GPPGPP--GPSGQPGQDGHPGQDGQPGQPGESREVPGAPGPAGQPGSQGEPGPSGPDGRP 252
Query: 738 XGGGKXXXP 712
G+ P
Sbjct: 253 GQPGQAGQP 261
>Z70271-3|CAA94234.1| 358|Caenorhabditis elegans Hypothetical
protein W08D2.6 protein.
Length = 358
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/59 (32%), Positives = 19/59 (32%)
Frame = -2
Query: 915 GXKGVPXKGXXXFPGXXXXXXXXXXXXQXGXKRXLRGPNPXGVXGXXGXPGXXGKXXXP 739
G KG KG PG G GP P G G G PG GK P
Sbjct: 260 GPKG--QKGETGHPGAQGTPGHNGPTGPPGDAGPDGGPGPQGEQGADGGPGSEGKVGRP 316
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 804 PNPXGVXGXXGXPGXXGKXXXPXGGG 727
P P GV G G PG GK P G
Sbjct: 108 PGPPGVAGNPGKPGKPGKPGAPGNPG 133
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical protein
K04H4.1b protein.
Length = 1502
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +2
Query: 668 GAXSPPXXLKPXKXXGXXXFPPPXGXXXXPXFPGFPXXPXTPXGLGPRR 814
G PP G F G P PG P P +P G P R
Sbjct: 1229 GYPGPPGLSGMPGHGGDQGFQGAAGRTGNPGLPGTPGYPGSPGGWAPSR 1277
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +2
Query: 668 GAXSPPXXLKPXKXXGXXXFPPPXGXXXXPXFPGFPXXPXTPXGLGPRR 814
G PP G F G P PG P P +P G P R
Sbjct: 1486 GYPGPPGLSGMPGHGGDQGFQGAAGRTGNPGLPGTPGYPGSPGGWAPSR 1534
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/60 (30%), Positives = 21/60 (35%), Gaps = 1/60 (1%)
Frame = -2
Query: 915 GXKGVPX-KGXXXFPGXXXXXXXXXXXXQXGXKRXLRGPNPXGVXGXXGXPGXXGKXXXP 739
G G+P KG +PG G K P P G+ G G PG G P
Sbjct: 732 GLPGLPGTKGEGGYPGRPGEVGQPGFPGLPGMKGDSGLPGPPGLPGHPGVPGDKGFGGVP 791
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/60 (30%), Positives = 21/60 (35%), Gaps = 1/60 (1%)
Frame = -2
Query: 915 GXKGVPX-KGXXXFPGXXXXXXXXXXXXQXGXKRXLRGPNPXGVXGXXGXPGXXGKXXXP 739
G G+P KG +PG G K P P G+ G G PG G P
Sbjct: 731 GLPGLPGTKGEGGYPGRPGEVGQPGFPGLPGMKGDSGLPGPPGLPGHPGVPGDKGFGGVP 790
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +2
Query: 668 GAXSPPXXLKPXKXXGXXXFPPPXGXXXXPXFPGFPXXPXTPXGLGPRR 814
G PP G F G P PG P P +P G P R
Sbjct: 1485 GYPGPPGLSGMPGHGGDQGFQGAAGRTGNPGLPGTPGYPGSPGGWAPSR 1533
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/60 (30%), Positives = 21/60 (35%), Gaps = 1/60 (1%)
Frame = -2
Query: 915 GXKGVPX-KGXXXFPGXXXXXXXXXXXXQXGXKRXLRGPNPXGVXGXXGXPGXXGKXXXP 739
G G+P KG +PG G K P P G+ G G PG G P
Sbjct: 731 GLPGLPGTKGEGGYPGRPGEVGQPGFPGLPGMKGDSGLPGPPGLPGHPGVPGDKGFGGVP 790
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/60 (30%), Positives = 21/60 (35%), Gaps = 1/60 (1%)
Frame = -2
Query: 915 GXKGVPX-KGXXXFPGXXXXXXXXXXXXQXGXKRXLRGPNPXGVXGXXGXPGXXGKXXXP 739
G G+P KG +PG G K P P G+ G G PG G P
Sbjct: 732 GLPGLPGTKGEGGYPGRPGEVGQPGFPGLPGMKGDSGLPGPPGLPGHPGVPGDKGFGGVP 791
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = +2
Query: 668 GAXSPPXXLKPXKXXGXXXFPPPXGXXXXPXFPGFPXXPXTPXGLGP 808
G PP L P G PPP G P G P P P GL P
Sbjct: 711 GGPPPPPGLPPITG-GPPPPPPPGGL---PPITGGPPPPPPPGGLPP 753
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = +2
Query: 668 GAXSPPXXLKPXKXXGXXXFPPPXGXXXXPXFPGFPXXPXTPXGLGP 808
G PP L P G PPP G P G P P P GL P
Sbjct: 711 GGPPPPPGLPPITG-GPPPPPPPGGL---PPITGGPPPPPPPGGLPP 753
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = -2
Query: 798 PXGVXGXXGXPGXXGKXXXPXGGGKXXXPXXFXGFRXXGGEXAP 667
P G G G PG G+ P GG P G GG P
Sbjct: 174 PPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGP 217
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = -2
Query: 798 PXGVXGXXGXPGXXGKXXXPXGGGKXXXPXXFXGFRXXGGEXAP 667
P G G G PG G+ P GG P G GG P
Sbjct: 454 PPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGP 497
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/60 (30%), Positives = 21/60 (35%), Gaps = 1/60 (1%)
Frame = -2
Query: 915 GXKGVPX-KGXXXFPGXXXXXXXXXXXXQXGXKRXLRGPNPXGVXGXXGXPGXXGKXXXP 739
G G+P KG +PG G K P P G+ G G PG G P
Sbjct: 768 GLPGLPGTKGEGGYPGRPGEVGQPGFPGLPGMKGDSGLPGPPGLPGHPGVPGDKGFGGVP 827
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = +2
Query: 665 FGAXSPPXXLKPXKXXGXXXFPPPXGXXXXPXFPGFPXXPXTPXGLGP 808
FG PP P PP P G P P P G GP
Sbjct: 364 FGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGP 411
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = +2
Query: 668 GAXSPPXXLKPXKXXGXXXFPPPXGXXXXPXFPGFPXXPXTPXGLGP 808
G PP L P G PPP G P G P P P GL P
Sbjct: 294 GGPPPPPGLPPITG-GPPPPPPPGGL---PPITGGPPPPPPPGGLPP 336
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,092,763
Number of Sequences: 27780
Number of extensions: 151383
Number of successful extensions: 1412
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1256
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2486134266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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