Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_P06
(886 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64859-10|AAC69091.2| 383|Caenorhabditis elegans Hypothetical p... 55 8e-08
Z70750-3|CAA94738.1| 374|Caenorhabditis elegans Hypothetical pr... 52 5e-07
U80843-8|AAB37963.1| 250|Caenorhabditis elegans Hypothetical pr... 51 1e-06
AF025465-6|AAB71030.1| 299|Caenorhabditis elegans Hypothetical ... 51 1e-06
Z49207-6|CAJ58500.1| 348|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z49207-5|CAA89070.1| 402|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AF016448-1|AAB65956.2| 477|Caenorhabditis elegans Temporarily a... 49 5e-06
AC024860-3|AAK29985.1| 345|Caenorhabditis elegans Hypothetical ... 48 7e-06
AL021497-4|CAA16407.1| 386|Caenorhabditis elegans Hypothetical ... 48 1e-05
AC024859-23|ABD63209.1| 299|Caenorhabditis elegans Hypothetical... 48 1e-05
Z92812-8|CAB07275.1| 337|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical pr... 42 6e-04
AL110477-10|CAB54334.1| 328|Caenorhabditis elegans Hypothetical... 38 0.010
AL033510-6|CAA22062.1| 343|Caenorhabditis elegans Hypothetical ... 38 0.013
AL021497-1|CAA16404.1| 382|Caenorhabditis elegans Hypothetical ... 36 0.029
L16685-6|ABD63199.1| 1047|Caenorhabditis elegans Trp (transient ... 33 0.27
L16685-5|AAA28167.3| 1027|Caenorhabditis elegans Trp (transient ... 33 0.27
AJ276027-1|CAC81654.1| 1027|Caenorhabditis elegans TRP homologou... 33 0.27
Z81531-8|CAB04322.2| 344|Caenorhabditis elegans Hypothetical pr... 31 0.83
Z75953-1|CAB00098.1| 400|Caenorhabditis elegans Hypothetical pr... 31 0.83
U41556-3|AAM51519.1| 378|Caenorhabditis elegans Cysteine protea... 31 1.1
U41556-2|ABS19475.1| 369|Caenorhabditis elegans Cysteine protea... 31 1.1
U41556-1|AAK39189.1| 379|Caenorhabditis elegans Cysteine protea... 31 1.1
L39939-1|AAA98789.1| 379|Caenorhabditis elegans cathepsin B-lik... 31 1.1
L39894-1|AAA98787.1| 379|Caenorhabditis elegans cathepsin B-lik... 31 1.1
AL032630-4|CAA21561.1| 212|Caenorhabditis elegans Hypothetical ... 31 1.4
Z78012-1|CAB01410.2| 329|Caenorhabditis elegans Hypothetical pr... 30 1.9
M74797-1|AAB88058.1| 329|Caenorhabditis elegans gut-specific cy... 30 1.9
L39927-1|AAA98784.1| 344|Caenorhabditis elegans cathepsin B-lik... 30 1.9
L39896-1|AAA98786.1| 344|Caenorhabditis elegans cathepsin B-lik... 30 1.9
AF016426-3|AAB65346.1| 344|Caenorhabditis elegans Cysteine prot... 30 1.9
Z81103-3|CAB03209.1| 467|Caenorhabditis elegans Hypothetical pr... 30 2.5
U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z82057-4|CAB61024.2| 370|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z81119-10|CAB61032.2| 370|Caenorhabditis elegans Hypothetical p... 29 3.3
L39925-1|AAA98782.1| 370|Caenorhabditis elegans cathepsin B-lik... 29 3.3
L39890-1|AAA98788.1| 370|Caenorhabditis elegans cathepsin B-lik... 29 3.3
U23529-9|AAL32210.1| 713|Caenorhabditis elegans G-protein-linke... 29 4.4
U23529-8|AAL32209.1| 682|Caenorhabditis elegans G-protein-linke... 29 4.4
U23529-7|AAL32211.1| 622|Caenorhabditis elegans G-protein-linke... 29 4.4
AF117301-1|AAF26202.1| 622|Caenorhabditis elegans G protein-lin... 29 4.4
AF117300-1|AAF26201.1| 713|Caenorhabditis elegans G protein-lin... 29 4.4
AF075245-1|AAD13747.1| 682|Caenorhabditis elegans G protein-lin... 29 4.4
U50313-3|AAA92327.1| 335|Caenorhabditis elegans Cysteine protea... 29 5.8
L39926-1|AAA98783.1| 335|Caenorhabditis elegans cathepsin B-lik... 29 5.8
L39895-1|AAA98785.1| 335|Caenorhabditis elegans cathepsin B-lik... 29 5.8
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 5.8
Z78416-3|CAB01680.2| 631|Caenorhabditis elegans Hypothetical pr... 28 7.7
>U64859-10|AAC69091.2| 383|Caenorhabditis elegans Hypothetical
protein R09F10.1 protein.
Length = 383
Score = 54.8 bits (126), Expect = 8e-08
Identities = 19/37 (51%), Positives = 29/37 (78%)
Frame = +3
Query: 774 VDWRTKGVIGPXRDQGLCGACWAFSTVGTIESMQAIK 884
+DWR +G + P ++QG CG+CWAF+TV ++E+ AIK
Sbjct: 172 IDWREQGKLTPIKNQGQCGSCWAFATVASVEAQNAIK 208
>Z70750-3|CAA94738.1| 374|Caenorhabditis elegans Hypothetical
protein C50F4.3 protein.
Length = 374
Score = 52.0 bits (119), Expect = 5e-07
Identities = 28/78 (35%), Positives = 48/78 (61%)
Frame = +2
Query: 329 NQKGKEELKPMFDEYIQKYNKSYKNKPDEYAVRFEHFVASVREIEELNAAARGPEEHRAR 508
++ E+L F+++I KY ++YK++ E RF+ FVA+ + ++N AA+ H +
Sbjct: 36 DRNNPEKLYKEFEDFIVKYKRNYKDE-IEKKFRFQQFVATHNRVGKMNKAAK-KAGHDTK 93
Query: 509 YGLTRISDMSKLEYKEIH 562
YG+ + SD+SK KEIH
Sbjct: 94 YGINKFSDLSK---KEIH 108
Score = 29.5 bits (63), Expect = 3.3
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +3
Query: 795 VIGPXRDQGLCGACWAFSTVGTIES 869
+IGP + Q C CW F+ E+
Sbjct: 156 IIGPIKTQDSCACCWGFAATAVAEA 180
>U80843-8|AAB37963.1| 250|Caenorhabditis elegans Hypothetical
protein C32B5.7 protein.
Length = 250
Score = 51.2 bits (117), Expect = 1e-06
Identities = 20/36 (55%), Positives = 27/36 (75%)
Frame = +3
Query: 774 VDWRTKGVIGPXRDQGLCGACWAFSTVGTIESMQAI 881
+DWR +GV+GP +DQG C A +AF+ + IESM AI
Sbjct: 72 LDWRDEGVVGPVKDQGNCNASYAFAAISAIESMYAI 107
>AF025465-6|AAB71030.1| 299|Caenorhabditis elegans Hypothetical
protein K02E7.10 protein.
Length = 299
Score = 51.2 bits (117), Expect = 1e-06
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = +3
Query: 774 VDWRTKGVIGPXRDQGLCGACWAFSTVGTIESMQA 878
+DWR KG++GP +DQG C A +AF+ + IESM A
Sbjct: 84 LDWREKGIVGPVKDQGKCNASYAFAAIAAIESMYA 118
>Z49207-6|CAJ58500.1| 348|Caenorhabditis elegans Hypothetical
protein R07E3.1b protein.
Length = 348
Score = 50.0 bits (114), Expect = 2e-06
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = +3
Query: 777 DWRTKGVIGPXRDQGLCGACWAFSTVGTIESMQAI 881
DWR K VI P + QG CG+CWAF++ T+E+ AI
Sbjct: 137 DWRDKNVITPVKAQGQCGSCWAFASTATVEAAWAI 171
>Z49207-5|CAA89070.1| 402|Caenorhabditis elegans Hypothetical
protein R07E3.1a protein.
Length = 402
Score = 50.0 bits (114), Expect = 2e-06
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = +3
Query: 777 DWRTKGVIGPXRDQGLCGACWAFSTVGTIESMQAI 881
DWR K VI P + QG CG+CWAF++ T+E+ AI
Sbjct: 191 DWRDKNVITPVKAQGQCGSCWAFASTATVEAAWAI 225
>AF016448-1|AAB65956.2| 477|Caenorhabditis elegans Temporarily
assigned gene nameprotein 196 protein.
Length = 477
Score = 48.8 bits (111), Expect = 5e-06
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 777 DWRTKGVIGPXRDQGLCGACWAFSTVGTIE 866
DWR KG + ++QG CG+CWAFST G +E
Sbjct: 269 DWREKGAVTQVKNQGNCGSCWAFSTTGNVE 298
Score = 41.1 bits (92), Expect = 0.001
Identities = 24/68 (35%), Positives = 37/68 (54%)
Frame = +2
Query: 362 FDEYIQKYNKSYKNKPDEYAVRFEHFVASVREIEELNAAARGPEEHRARYGLTRISDMSK 541
F +++ ++ K Y NK E RF F + + I EL +G A YG T+ SDM+
Sbjct: 174 FLDFVDRHEKKYTNKR-EVLKRFRVFKKNAKVIRELQKNEQGT----AVYGFTKFSDMTT 228
Query: 542 LEYKEIHL 565
+E+K+I L
Sbjct: 229 MEFKKIML 236
>AC024860-3|AAK29985.1| 345|Caenorhabditis elegans Hypothetical
protein Y71H2AR.2 protein.
Length = 345
Score = 48.4 bits (110), Expect = 7e-06
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = +3
Query: 774 VDWRTKGVIGPXRDQGLCGACWAFSTVGTIESMQA 878
+DWR KG++GP +DQG C A AF+ +IESM A
Sbjct: 86 LDWREKGIVGPVKDQGKCNASHAFAITSSIESMYA 120
>AL021497-4|CAA16407.1| 386|Caenorhabditis elegans Hypothetical
protein Y51A2D.8 protein.
Length = 386
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/69 (31%), Positives = 43/69 (62%)
Frame = +2
Query: 344 EELKPMFDEYIQKYNKSYKNKPDEYAVRFEHFVASVREIEELNAAARGPEEHRARYGLTR 523
E+L F+++ +KYN+ YK++ E RF +FV S +++LNA ++ + ++G+ +
Sbjct: 37 EKLYKAFEDFKKKYNRKYKDE-SENQQRFNNFVKSYNNVDKLNAKSKA-AGYDTQFGINK 94
Query: 524 ISDMSKLEY 550
SD+S E+
Sbjct: 95 FSDLSTAEF 103
Score = 37.5 bits (83), Expect = 0.013
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 795 VIGPXRDQGLCGACWAFSTVGTIESMQA 878
++GP +DQG C CW F+ +E++ A
Sbjct: 163 IVGPIKDQGQCACCWGFAVTALVETVYA 190
>AC024859-23|ABD63209.1| 299|Caenorhabditis elegans Hypothetical
protein Y71H2AM.25 protein.
Length = 299
Score = 47.6 bits (108), Expect = 1e-05
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = +3
Query: 774 VDWRTKGVIGPXRDQGLCGACWAFSTVGTIESMQA 878
+DWR KG++GP +DQG C A AF+ +IESM A
Sbjct: 86 LDWRDKGIVGPVKDQGKCNASHAFAISSSIESMYA 120
>Z92812-8|CAB07275.1| 337|Caenorhabditis elegans Hypothetical
protein T03E6.7 protein.
Length = 337
Score = 47.2 bits (107), Expect = 2e-05
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +3
Query: 774 VDWRTKGVIGPXRDQGLCGACWAFSTVGTIESMQAIK 884
VDWR ++ ++QG+CG+CWAFS G +E A K
Sbjct: 124 VDWRDTHLVTDVKNQGMCGSCWAFSATGALEGQHARK 160
>Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical
protein F15D4.4 protein.
Length = 608
Score = 41.9 bits (94), Expect = 6e-04
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = +3
Query: 774 VDWRTKGVIGPXRDQGLCGACWAFSTVGTIESMQAIK 884
VDWR + P DQ CG CWAFS + IES AI+
Sbjct: 227 VDWRP--FLKPILDQSTCGGCWAFSMISMIESFFAIQ 261
>AL110477-10|CAB54334.1| 328|Caenorhabditis elegans Hypothetical
protein Y113G7B.15 protein.
Length = 328
Score = 37.9 bits (84), Expect = 0.010
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 795 VIGPXRDQGLCGACWAFSTVGTIESMQAI 881
V+GP +DQ CG CWAF+T E+ +
Sbjct: 113 VVGPVKDQEQCGCCWAFATTAITEAANTL 141
Score = 32.3 bits (70), Expect = 0.47
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +2
Query: 383 YNKSYKNKPDEYAVRFEHFVASVREIEELNAAARGPEEHRARYGLTRISDMSKLE 547
++K + P E R HF + ++I+ELNA AR E +G + +D ++ E
Sbjct: 2 HHKKHYRTPAEKDRRLAHFAKNHQKIQELNAKAR-REGRNVTFGWNKFADKNRQE 55
>AL033510-6|CAA22062.1| 343|Caenorhabditis elegans Hypothetical
protein Y40H7A.10 protein.
Length = 343
Score = 37.5 bits (83), Expect = 0.013
Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Frame = +3
Query: 774 VDWR----TKGVIGPXRDQGLCGACWAFSTVGTIESMQAI 881
VDWR T V G + QG CG+CWAF+T IES +I
Sbjct: 139 VDWRNVNGTNHVTG-IKYQGPCGSCWAFATAAAIESAVSI 177
>AL021497-1|CAA16404.1| 382|Caenorhabditis elegans Hypothetical
protein Y51A2D.1 protein.
Length = 382
Score = 36.3 bits (80), Expect = 0.029
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +3
Query: 795 VIGPXRDQGLCGACWAFSTVGTIESMQAI 881
++GP ++QG C CW F+ +E++ A+
Sbjct: 157 IVGPIKNQGQCACCWGFAVTAMLETIYAV 185
>L16685-6|ABD63199.1| 1047|Caenorhabditis elegans Trp (transient
receptor potential)channel family protein 1, isoform b
protein.
Length = 1047
Score = 33.1 bits (72), Expect = 0.27
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 251 MKKWWNWVLGFALICLLFVAVPLTLS 328
M++WWNW L F +ICL + + LS
Sbjct: 484 MRQWWNW-LDFLMICLYLCTISIRLS 508
>L16685-5|AAA28167.3| 1027|Caenorhabditis elegans Trp (transient
receptor potential)channel family protein 1, isoform a
protein.
Length = 1027
Score = 33.1 bits (72), Expect = 0.27
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 251 MKKWWNWVLGFALICLLFVAVPLTLS 328
M++WWNW L F +ICL + + LS
Sbjct: 464 MRQWWNW-LDFLMICLYLCTISIRLS 488
>AJ276027-1|CAC81654.1| 1027|Caenorhabditis elegans TRP homologous
cation channel proteinprotein.
Length = 1027
Score = 33.1 bits (72), Expect = 0.27
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 251 MKKWWNWVLGFALICLLFVAVPLTLS 328
M++WWNW L F +ICL + + LS
Sbjct: 464 MRQWWNW-LDFLMICLYLCTISIRLS 488
>Z81531-8|CAB04322.2| 344|Caenorhabditis elegans Hypothetical
protein F36D3.9 protein.
Length = 344
Score = 31.5 bits (68), Expect = 0.83
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 810 RDQGLCGACWAFSTVGTIESMQAI 881
R+Q CG+CWAFST I I
Sbjct: 121 REQSNCGSCWAFSTAEVISDRTCI 144
>Z75953-1|CAB00098.1| 400|Caenorhabditis elegans Hypothetical
protein F57F5.1 protein.
Length = 400
Score = 31.5 bits (68), Expect = 0.83
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +3
Query: 780 WRTKGVIGPXRDQGLCGACWAFSTVGTI 863
W I RDQ CG+CWA S TI
Sbjct: 156 WPNCPSISKIRDQSSCGSCWAVSAAETI 183
>U41556-3|AAM51519.1| 378|Caenorhabditis elegans Cysteine protease
related protein6, isoform b protein.
Length = 378
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 777 DWRTKGVIGPXRDQGLCGACWAFSTVGTIESM 872
+W I RDQ CG+CWAF G +E+M
Sbjct: 113 NWPKCDSIKVIRDQSSCGSCWAF---GAVEAM 141
>U41556-2|ABS19475.1| 369|Caenorhabditis elegans Cysteine protease
related protein6, isoform c protein.
Length = 369
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 777 DWRTKGVIGPXRDQGLCGACWAFSTVGTIESM 872
+W I RDQ CG+CWAF G +E+M
Sbjct: 104 NWPKCDSIKVIRDQSSCGSCWAF---GAVEAM 132
>U41556-1|AAK39189.1| 379|Caenorhabditis elegans Cysteine protease
related protein6, isoform a protein.
Length = 379
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 777 DWRTKGVIGPXRDQGLCGACWAFSTVGTIESM 872
+W I RDQ CG+CWAF G +E+M
Sbjct: 114 NWPKCDSIKVIRDQSSCGSCWAF---GAVEAM 142
>L39939-1|AAA98789.1| 379|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 379
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 777 DWRTKGVIGPXRDQGLCGACWAFSTVGTIESM 872
+W I RDQ CG+CWAF G +E+M
Sbjct: 114 NWPKCDSIKVIRDQSSCGSCWAF---GAVEAM 142
>L39894-1|AAA98787.1| 379|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 379
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 777 DWRTKGVIGPXRDQGLCGACWAFSTVGTIESM 872
+W I RDQ CG+CWAF G +E+M
Sbjct: 114 NWPKCDSIKVIRDQSSCGSCWAF---GAVEAM 142
>AL032630-4|CAA21561.1| 212|Caenorhabditis elegans Hypothetical
protein Y62H9A.4 protein.
Length = 212
Score = 30.7 bits (66), Expect = 1.4
Identities = 26/102 (25%), Positives = 42/102 (41%), Gaps = 4/102 (3%)
Frame = +2
Query: 440 VASVREIEELNAAARGPEEH-RARYGLTRISDMSKLEYKEIHLSDERLKKSPHLYGKSWS 616
V S + + + P H RY + SD S+ E K SDER + P +Y
Sbjct: 14 VVSANQYNDYGTISHYPGHHSNNRYSTSDSSDSSENELKSRSNSDERYPEYPGVYA---- 69
Query: 617 KFRDQKPENTVGNDDND--TPHSSHQRNR-TPCANEPHHNVY 733
Q P G + N+ P++ +++N C H +V+
Sbjct: 70 ---PQPPATNYGTNGNEYRPPNNVYEQNEYEQCKEIKHFSVH 108
>Z78012-1|CAB01410.2| 329|Caenorhabditis elegans Hypothetical
protein C52E4.1 protein.
Length = 329
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 810 RDQGLCGACWAFSTVGTIESMQAIK 884
RDQ CG+CWAF I I+
Sbjct: 105 RDQATCGSCWAFGAAEMISDRTCIE 129
>M74797-1|AAB88058.1| 329|Caenorhabditis elegans gut-specific
cysteine protease-1 protein.
Length = 329
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 810 RDQGLCGACWAFSTVGTIESMQAIK 884
RDQ CG+CWAF I I+
Sbjct: 105 RDQATCGSCWAFGAAEMISDRTCIE 129
>L39927-1|AAA98784.1| 344|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 344
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +3
Query: 780 WRTKGVIGPXRDQGLCGACWAFSTVGTIESMQAI 881
W I RDQ CG+CWAF+ I I
Sbjct: 92 WPNCMSINNIRDQSDCGSCWAFAAAEAISDRTCI 125
>L39896-1|AAA98786.1| 344|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 344
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +3
Query: 780 WRTKGVIGPXRDQGLCGACWAFSTVGTIESMQAI 881
W I RDQ CG+CWAF+ I I
Sbjct: 92 WPNCMSINNIRDQSDCGSCWAFAAAEAISDRTCI 125
>AF016426-3|AAB65346.1| 344|Caenorhabditis elegans Cysteine
protease related protein 5 protein.
Length = 344
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +3
Query: 780 WRTKGVIGPXRDQGLCGACWAFSTVGTIESMQAI 881
W I RDQ CG+CWAF+ I I
Sbjct: 92 WPNCMSINNIRDQSDCGSCWAFAAAEAISDRTCI 125
>Z81103-3|CAB03209.1| 467|Caenorhabditis elegans Hypothetical
protein M04G12.2 protein.
Length = 467
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 6/35 (17%)
Frame = +3
Query: 777 DWRT-KGV--IGPXRDQGL---CGACWAFSTVGTI 863
DWR GV P R+Q + CG+CW F T G +
Sbjct: 226 DWRNVSGVNYCSPTRNQHIPVYCGSCWVFGTTGAL 260
>U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical protein
F42C5.10 protein.
Length = 1292
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = -3
Query: 734 HKHYDEVHL---HMAFYFSGGCCGVYHYHHFQQYFQVS 630
H HYD VH+ H Y + G V+HYH + Q S
Sbjct: 937 HHHYDTVHVQHHHHHHYHTDGSEHVHHYHQDENAHQHS 974
>Z82057-4|CAB61024.2| 370|Caenorhabditis elegans Hypothetical
protein T10H4.12 protein.
Length = 370
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +3
Query: 780 WRTKGVIGPXRDQGLCGACWAFSTVGTIESMQAIK 884
W I R+Q CG+CWAF I I+
Sbjct: 102 WPDCNTIKLIRNQATCGSCWAFGAAEVISDRVCIQ 136
>Z81119-10|CAB61032.2| 370|Caenorhabditis elegans Hypothetical
protein T10H4.12 protein.
Length = 370
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +3
Query: 780 WRTKGVIGPXRDQGLCGACWAFSTVGTIESMQAIK 884
W I R+Q CG+CWAF I I+
Sbjct: 102 WPDCNTIKLIRNQATCGSCWAFGAAEVISDRVCIQ 136
>L39925-1|AAA98782.1| 370|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 370
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +3
Query: 780 WRTKGVIGPXRDQGLCGACWAFSTVGTIESMQAIK 884
W I R+Q CG+CWAF I I+
Sbjct: 102 WPDCNTIKLIRNQATCGSCWAFGAAEVISDRVCIQ 136
>L39890-1|AAA98788.1| 370|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 370
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +3
Query: 780 WRTKGVIGPXRDQGLCGACWAFSTVGTIESMQAIK 884
W I R+Q CG+CWAF I I+
Sbjct: 102 WPDCNTIKLIRNQATCGSCWAFGAAEVISDRVCIQ 136
>U23529-9|AAL32210.1| 713|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor protein 1, isoform b protein.
Length = 713
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 500 RARYGLTR-ISDMSKLEYKEIHLSDERLKKSPHLYGKSWSKFRDQKPENTVGNDDNDTPH 676
R+RY + I+ + + KE+ +D K S F+++K +NT N+D+DT
Sbjct: 380 RSRYSASESITTTHENDEKEVEKADSLQKLFADDELGSVLNFKEEKLKNTDSNNDSDTTS 439
Query: 677 SSHQRNR 697
QR+R
Sbjct: 440 VILQRSR 446
>U23529-8|AAL32209.1| 682|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor protein 1, isoform a protein.
Length = 682
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 500 RARYGLTR-ISDMSKLEYKEIHLSDERLKKSPHLYGKSWSKFRDQKPENTVGNDDNDTPH 676
R+RY + I+ + + KE+ +D K S F+++K +NT N+D+DT
Sbjct: 349 RSRYSASESITTTHENDEKEVEKADSLQKLFADDELGSVLNFKEEKLKNTDSNNDSDTTS 408
Query: 677 SSHQRNR 697
QR+R
Sbjct: 409 VILQRSR 415
>U23529-7|AAL32211.1| 622|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor protein 1, isoform c protein.
Length = 622
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 500 RARYGLTR-ISDMSKLEYKEIHLSDERLKKSPHLYGKSWSKFRDQKPENTVGNDDNDTPH 676
R+RY + I+ + + KE+ +D K S F+++K +NT N+D+DT
Sbjct: 349 RSRYSASESITTTHENDEKEVEKADSLQKLFADDELGSVLNFKEEKLKNTDSNNDSDTTS 408
Query: 677 SSHQRNR 697
QR+R
Sbjct: 409 VILQRSR 415
>AF117301-1|AAF26202.1| 622|Caenorhabditis elegans G protein-linked
acetylcholinereceptor GAR-1c protein.
Length = 622
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 500 RARYGLTR-ISDMSKLEYKEIHLSDERLKKSPHLYGKSWSKFRDQKPENTVGNDDNDTPH 676
R+RY + I+ + + KE+ +D K S F+++K +NT N+D+DT
Sbjct: 349 RSRYSASESITTTHENDEKEVEKADSLQKLFADDELGSVLNFKEEKLKNTDSNNDSDTTS 408
Query: 677 SSHQRNR 697
QR+R
Sbjct: 409 VILQRSR 415
>AF117300-1|AAF26201.1| 713|Caenorhabditis elegans G protein-linked
acetylcholinereceptor GAR-1a protein.
Length = 713
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 500 RARYGLTR-ISDMSKLEYKEIHLSDERLKKSPHLYGKSWSKFRDQKPENTVGNDDNDTPH 676
R+RY + I+ + + KE+ +D K S F+++K +NT N+D+DT
Sbjct: 380 RSRYSASESITTTHENDEKEVEKADSLQKLFADDELGSVLNFKEEKLKNTDSNNDSDTTS 439
Query: 677 SSHQRNR 697
QR+R
Sbjct: 440 VILQRSR 446
>AF075245-1|AAD13747.1| 682|Caenorhabditis elegans G protein-linked
acetylcholinereceptor GAR-1b protein.
Length = 682
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 500 RARYGLTR-ISDMSKLEYKEIHLSDERLKKSPHLYGKSWSKFRDQKPENTVGNDDNDTPH 676
R+RY + I+ + + KE+ +D K S F+++K +NT N+D+DT
Sbjct: 349 RSRYSASESITTTHENDEKEVEKADSLQKLFADDELGSVLNFKEEKLKNTDSNNDSDTTS 408
Query: 677 SSHQRNR 697
QR+R
Sbjct: 409 VILQRSR 415
>U50313-3|AAA92327.1| 335|Caenorhabditis elegans Cysteine protease
related protein 4 protein.
Length = 335
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 780 WRTKGVIGPXRDQGLCGACWAFS 848
W I RDQ CG+CWAF+
Sbjct: 91 WPNCMSINNIRDQSDCGSCWAFA 113
>L39926-1|AAA98783.1| 335|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 335
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 780 WRTKGVIGPXRDQGLCGACWAFS 848
W I RDQ CG+CWAF+
Sbjct: 91 WPNCMSINNIRDQSDCGSCWAFA 113
>L39895-1|AAA98785.1| 335|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 335
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 780 WRTKGVIGPXRDQGLCGACWAFS 848
W I RDQ CG+CWAF+
Sbjct: 91 WPNCMSINNIRDQSDCGSCWAFA 113
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 5.8
Identities = 23/99 (23%), Positives = 45/99 (45%)
Frame = +2
Query: 452 REIEELNAAARGPEEHRARYGLTRISDMSKLEYKEIHLSDERLKKSPHLYGKSWSKFRDQ 631
+E EE A+ E +A+ R ++ + K + +R K+ + + K
Sbjct: 127 KEKEEEERRAK-EERKKAKKEKQRQKELEERNRKAEEAASKRRKREAEVEAERKRK---- 181
Query: 632 KPENTVGNDDNDTPHSSHQRNRTPCANEPHHNVYVIIRK 748
+ E +V +DD+D P +RNR + +P + + I +K
Sbjct: 182 RKEISVDSDDDDKPALLEKRNRRDSSTQPSSSSFQINQK 220
>Z78416-3|CAB01680.2| 631|Caenorhabditis elegans Hypothetical
protein C23H4.3 protein.
Length = 631
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +2
Query: 251 MKKWWNWVLGFALICLLFVAVPLTLSNQKGKEEL 352
+K+WW +++ F +I LL V + + L K +EEL
Sbjct: 595 LKQWWFYLIIFLMI-LLVVLIVICLRKPKREEEL 627
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,316,425
Number of Sequences: 27780
Number of extensions: 397043
Number of successful extensions: 1223
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1220
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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