Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_P05
         (882 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    25   1.0  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    23   2.4  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    23   2.4  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    23   2.4  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   3.2  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    23   4.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   4.2  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
 Frame = -3

Query: 535 VTQHCMKSSNNIVPLPN-----LSNFCTIIPTTSSDNLYPKAVSAF 413
           +T+ CM +SN I   PN     LSN   I P T+++ L  K +  F
Sbjct: 306 ITKACMSASNLIQRTPNICYKLLSNL-GIFPKTTNEQLLRKELLLF 350


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -3

Query: 838 ITVLGI*FLSFINLHMHFSKILHTKIAKLSFVF 740
           +T+LG  F++ + LH  F+K L+   A   F +
Sbjct: 77  VTILGATFVTVLQLHKIFAKGLNVIEANRLFFY 109


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -3

Query: 838 ITVLGI*FLSFINLHMHFSKILHTKIAKLSFVF 740
           +T+LG  F++ + LH  F+K L+   A   F +
Sbjct: 77  VTILGATFVTVLQLHKIFAKGLNVIEANRLFFY 109


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -3

Query: 838 ITVLGI*FLSFINLHMHFSKILHTKIAKLSFVF 740
           +T+LG  F++ + LH  F+K L+   A   F +
Sbjct: 77  VTILGATFVTVLQLHKIFAKGLNVIEANRLFFY 109


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 17/66 (25%), Positives = 29/66 (43%)
 Frame = +3

Query: 354 NCFRSFDRDNSGNIDRVELKNALTAFGYRLSDDVVGIMVQKFDRFGRGTILFDDFIQCCV 533
           N FR+        I+ +E  N +  +   +SD   GI+V +F         F   +  C+
Sbjct: 216 NGFRNVAESRKIFIECIEQYNVILRYTKIVSDTYQGILVVQF---------FCSLVALCL 266

Query: 534 TLYTLT 551
           T+Y L+
Sbjct: 267 TMYKLS 272


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
 Frame = -3

Query: 442 NLYPKAVSAFFNSTLSIFPELSRSNDRKQFCQSETYFQSAPKSSNDMTPLFCLSNIPI-I 266
           N YP+ +    NSTL++   L ++    +F            +S  +  LF L  I + +
Sbjct: 91  NWYPRLIIGIMNSTLNLIFLLIQT----RFEMINNIITRGDVTSTTIKKLFNLHKILVKV 146

Query: 265 RRTVSGLNGFHV 230
            R ++G+  F V
Sbjct: 147 VREINGIFAFQV 158


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +3

Query: 486 FGRGTILFDDFIQCCVTLYTLTSAF 560
           F R  I+F     C  +LY L S F
Sbjct: 301 FCRAFIIFPTHFYCAFSLYPLKSTF 325


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,912
Number of Sequences: 336
Number of extensions: 5462
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24410188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)