Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_P05
(882 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 57 3e-09
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 48 2e-06
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 46 9e-06
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 33 0.041
SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccha... 32 0.12
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 29 1.2
SPAC3H8.05c |||conserved fungal protein|Schizosaccharomyces pomb... 28 1.5
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 27 2.7
SPAC1687.14c |||EF hand family protein, unknown role|Schizosacch... 27 2.7
SPAC13D6.01 |pof14||F-box protein Pof14|Schizosaccharomyces pomb... 27 4.7
SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation protein... 26 8.2
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 57.2 bits (132), Expect = 3e-09
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 7/127 (5%)
Frame = +3
Query: 159 FRSVDKDRSGYISADELQQALSNGTWNPFNPETVRLMIGMFDKQNRGVISFEDFGALW-K 335
F D+D+ G I+++EL + + +P E ++ MI D G I F +F + +
Sbjct: 18 FSLFDRDQDGNITSNELGVVMRSLGQSPTAAE-LQDMINEVDADGNGTIDFTEFLTMMAR 76
Query: 336 YVSDWQN------CFRSFDRDNSGNIDRVELKNALTAFGYRLSDDVVGIMVQKFDRFGRG 497
+ D N F+ FD+D +G I EL + LT+ G RLS + V M+++ D G G
Sbjct: 77 KMKDTDNEEEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDGDG 136
Query: 498 TILFDDF 518
I +++F
Sbjct: 137 VINYEEF 143
Score = 42.7 bits (96), Expect = 7e-05
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Frame = +3
Query: 339 VSDWQNCFRSFDRDNSGNIDRVELKNALTAFGYRLSDDVVGIMVQKFDRFGRGTILFDDF 518
+++++ F FDRD GNI EL + + G + + M+ + D G GTI F +F
Sbjct: 11 IAEFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTIDFTEF 70
Query: 519 IQCCVTLYTLT-------SAFRQYDSDQDGVITI 599
+ T AF+ +D D +G IT+
Sbjct: 71 LTMMARKMKDTDNEEEVREAFKVFDKDGNGYITV 104
Score = 35.1 bits (77), Expect = 0.013
Identities = 33/138 (23%), Positives = 60/138 (43%), Gaps = 16/138 (11%)
Frame = +3
Query: 261 RLMIGMFDKQNRGVISFEDFGALWKYV------SDWQNCFRSFDRDNSGNIDRVELKNAL 422
R +FD+ G I+ + G + + + ++ Q+ D D +G ID E L
Sbjct: 15 REAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTIDFTEF---L 71
Query: 423 TAFGYRLSD----DVVGIMVQKFDRFGRGTILFDDFIQCCVTL------YTLTSAFRQYD 572
T ++ D + V + FD+ G G I ++ +L + R+ D
Sbjct: 72 TMMARKMKDTDNEEEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREAD 131
Query: 573 SDQDGVITIHYEQFLKMV 626
+D DGVI +YE+F +++
Sbjct: 132 TDGDGVI--NYEEFSRVI 147
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 48.0 bits (109), Expect = 2e-06
Identities = 22/60 (36%), Positives = 36/60 (60%)
Frame = +3
Query: 345 DWQNCFRSFDRDNSGNIDRVELKNALTAFGYRLSDDVVGIMVQKFDRFGRGTILFDDFIQ 524
++ FR FD+DNSG I+ + + + G +LSD+ V +MVQ+ D G+ + DF+Q
Sbjct: 79 EYIKAFRVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQLMVQEADPTNSGSFDYYDFVQ 138
Score = 30.3 bits (65), Expect = 0.38
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +3
Query: 159 FRSVDKDRSGYISADELQQALSNGTWNPFNPETVRLMIGMFDKQNRGVISFEDF 320
FR DKD SGYI + + + V+LM+ D N G + DF
Sbjct: 84 FRVFDKDNSGYIETAKFADYMKT-LGEKLSDNEVQLMVQEADPTNSGSFDYYDF 136
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 45.6 bits (103), Expect = 9e-06
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Frame = +3
Query: 345 DWQNCFRSFDRDNSGNIDRVELKNALTAFGYRLSDDVVGIMVQKFDRFGRGTILFDDFIQ 524
D F+ FD D ID EL+ A+ A G+ V +++ FD+ G+G + +DF++
Sbjct: 38 DINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGYLQMEDFVR 97
Query: 525 CCV-------TLYTLTSAFRQYDSDQDGVITI 599
L + AF +D D+ G I++
Sbjct: 98 VMTEKIVERDPLEEIKRAFELFDDDETGKISL 129
Score = 43.2 bits (97), Expect = 5e-05
Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 7/128 (5%)
Frame = +3
Query: 159 FRSVDKDRSGYISADELQQALSNGTWNPFNPETVRLMIGMFDKQNRGVISFEDFGALW-- 332
F+ D D+ I EL+ A+ +N E ++++ FDK +G + EDF +
Sbjct: 43 FKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRD-FDKTGKGYLQMEDFVRVMTE 101
Query: 333 KYVS-----DWQNCFRSFDRDNSGNIDRVELKNALTAFGYRLSDDVVGIMVQKFDRFGRG 497
K V + + F FD D +G I L+ + D + M+++FD G
Sbjct: 102 KIVERDPLEEIKRAFELFDDDETGKISLRNLRRVAKELNENIDDQELEAMIEEFDLDQDG 161
Query: 498 TILFDDFI 521
I +FI
Sbjct: 162 EINEQEFI 169
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 33.5 bits (73), Expect = 0.041
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +3
Query: 117 FQSPMPSRDFLWNIFRSVDKDRSGYISADELQQALSNGTWNPFNPETVRLMIGMFDKQNR 296
F P ++++N+F D D++GYI E ALS + N + + ++D N
Sbjct: 58 FGDPSAFAEYVFNVF---DADKNGYIDFKEFICALSVTSRGELNDKLI-WAFQLYDLDNN 113
Query: 297 GVISFED 317
G+IS+++
Sbjct: 114 GLISYDE 120
>SPAC926.03 |rlc1||myosin II regulatory light chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 31.9 bits (69), Expect = 0.12
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +3
Query: 339 VSDWQNCFRSFDRDNSGNIDRVELKNALTAFGYRLSDDVVGIMVQKFD 482
+ + + F D+D GNI R ++K LT+ S+D + M + +
Sbjct: 47 IQELKEAFALLDKDGDGNIGREDVKTMLTSLNQDASEDSINHMFESIN 94
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 28.7 bits (61), Expect = 1.2
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 7/86 (8%)
Frame = +3
Query: 360 FRSFDRDNSGNIDRVELKNALTAFGYRLSDDVVGIMVQKFDRFGRGTILFDDFIQCCVTL 539
F D + SG+IDR E + + L+ + ++ D G G + F +FI
Sbjct: 30 FIKIDANQSGSIDRNEFLSIPSVASNPLASRLFSVV----DEDGGGDVDFQEFINSLSVF 85
Query: 540 YT-------LTSAFRQYDSDQDGVIT 596
L AF+ YD D+DG I+
Sbjct: 86 SVHGNKEEKLKFAFKIYDIDRDGYIS 111
>SPAC3H8.05c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1073
Score = 28.3 bits (60), Expect = 1.5
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 821 DTENSDLGLVCNDTDXRL 874
D+EN+ L LVC+DT RL
Sbjct: 950 DSENNSLNLVCSDTSSRL 967
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 27.5 bits (58), Expect = 2.7
Identities = 10/40 (25%), Positives = 24/40 (60%)
Frame = -3
Query: 514 SSNNIVPLPNLSNFCTIIPTTSSDNLYPKAVSAFFNSTLS 395
++ +VP +N + +PTT+ +++P + F+N+T +
Sbjct: 141 NTTTVVPPTTHANTTSFVPTTTESSIHP-ITTGFYNTTFT 179
>SPAC1687.14c |||EF hand family protein, unknown
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 76
Score = 27.5 bits (58), Expect = 2.7
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +3
Query: 159 FRSVDKDRSGYISADELQQALSNGTWNPFNPETVRLMIGMFDKQNRGVISFEDFGALWKY 338
F D GYI ++L+++ + N E ++LM+ + G +S E+F LW +
Sbjct: 18 FDLFDVTHKGYIDFEDLRRSCAQLGEN-LTKEQLQLMLDLAG--TNGKVSREEFAELWIH 74
Query: 339 VS 344
+S
Sbjct: 75 IS 76
>SPAC13D6.01 |pof14||F-box protein Pof14|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 431
Score = 26.6 bits (56), Expect = 4.7
Identities = 16/67 (23%), Positives = 27/67 (40%)
Frame = -3
Query: 523 CMKSSNNIVPLPNLSNFCTIIPTTSSDNLYPKAVSAFFNSTLSIFPELSRSNDRKQFCQS 344
C +S N + ++ TIIP + A + T S+ + ++ D Q C
Sbjct: 246 CSESINTSA-VAKFTDIPTIIPIFLDPSYQSYAAKTIHSDTSSLASSIIQTGDGTQSCDE 304
Query: 343 ETYFQSA 323
TY + A
Sbjct: 305 STYIELA 311
>SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 715
Score = 25.8 bits (54), Expect = 8.2
Identities = 29/105 (27%), Positives = 41/105 (39%), Gaps = 6/105 (5%)
Frame = -3
Query: 496 PLPNLSNFCTIIPTTSSDNLYPKAV------SAFFNSTLSIFPELSRSNDRKQFCQSETY 335
P NF I T S NLY ++V ++ N T + E+ S D E
Sbjct: 362 PTGKRQNFINITVTDPSKNLYERSVKTAAELASLQNVTETTDNEIPNSPDFLDAASEEDE 421
Query: 334 FQSAPKSSNDMTPLFCLSNIPIIRRTVSGLNGFHVPLDRACCSSS 200
+ SS+ +TPL L N + + F PL + SSS
Sbjct: 422 HIPSLDSSSLLTPL-ALPNKKAFQPVKFRVPSFSSPLVKPASSSS 465
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,902,952
Number of Sequences: 5004
Number of extensions: 89288
Number of successful extensions: 260
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 257
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 442483990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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