Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_P05
         (882 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...    28   0.33 
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    26   1.7  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   9.3  

>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score = 28.3 bits (60), Expect = 0.33
 Identities = 13/54 (24%), Positives = 26/54 (48%)
 Frame = -2

Query: 530 AALYEIIKQYCPSTESIKFLHHYTNNIIRQSVSKGCKCILQFHSIYIPRIITVK 369
           A +  IIK+   ST+    +     + I + + K C+ +   H +YI ++  +K
Sbjct: 169 AKMTAIIKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVYIRKVKVLK 222


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -1

Query: 198 QICNHFYLCQHF*KCSIRNLCLALAIGKSF 109
           Q+C H YL     + +I NLC+   I + F
Sbjct: 113 QMCLHLYLSPDVVQANIHNLCVLRVIWRVF 142


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 8/32 (25%), Positives = 19/32 (59%)
 Frame = -2

Query: 212  LQFISRYVTTSIFVNTSKNVP*EISAWHWRLE 117
            + F+  + T ++ V   +N+P +IS W  +++
Sbjct: 2918 MSFVDGFTTATVGVLFLRNLPRQISKWSGKVK 2949


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 976,675
Number of Sequences: 2352
Number of extensions: 22398
Number of successful extensions: 81
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 81
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94680279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)