Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_P04
         (883 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q05FW6 Cluster: Putative uncharacterized protein; n=1; ...    34   5.5  
UniRef50_Q4RP04 Cluster: Chromosome 10 SCAF15009, whole genome s...    33   9.6  
UniRef50_Q02803 Cluster: Ornithine decarboxylase antizyme; n=2; ...    33   9.6  

>UniRef50_Q05FW6 Cluster: Putative uncharacterized protein; n=1;
           Candidatus Carsonella ruddii PV|Rep: Putative
           uncharacterized protein - Carsonella ruddii (strain PV)
          Length = 162

 Score = 33.9 bits (74), Expect = 5.5
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
 Frame = +1

Query: 358 FVDFNCCFIFNI---HLYRLVLCFYL*K*YVYLNRIFYINETKFPALRFLIKE*NFRFKF 528
           F+  N C +F+     ++    CFY  K  +++N      +  F  L+F   E N   KF
Sbjct: 5   FLIKNLCNLFSFGKDSVFFFFKCFYKKKKNIFINYNLIYFKKYF--LQFFNPEINIFKKF 62

Query: 529 TFKSIVLSAIRIKIIDNNF 585
           TF  ++   I+I I+ N F
Sbjct: 63  TFNELIFRKIKISIVKNTF 81


>UniRef50_Q4RP04 Cluster: Chromosome 10 SCAF15009, whole genome
           shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 10
           SCAF15009, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 392

 Score = 33.1 bits (72), Expect = 9.6
 Identities = 16/52 (30%), Positives = 30/52 (57%)
 Frame = +2

Query: 557 FVLKLSTIIFVSKKKETRSDGILNLLRFVLDRCVHITRVG*LLFEACEHFVL 712
           FVLK ++  + S ++  +++G +NL  FV+DR +   +     F+AC   V+
Sbjct: 49  FVLKKTSFYWYSNQQAEKAEGYINLTNFVIDRAIECKKKH--AFKACHPQVM 98


>UniRef50_Q02803 Cluster: Ornithine decarboxylase antizyme; n=2;
           Saccharomyces cerevisiae|Rep: Ornithine decarboxylase
           antizyme - Saccharomyces cerevisiae (Baker's yeast)
          Length = 292

 Score = 33.1 bits (72), Expect = 9.6
 Identities = 27/88 (30%), Positives = 40/88 (45%)
 Frame = +1

Query: 343 YLPLNFVDFNCCFIFNIHLYRLVLCFYL*K*YVYLNRIFYINETKFPALRFLIKE*NFRF 522
           YLPL   +   C + N + + +VL   L    V+ N   YIN+    AL  L    N  F
Sbjct: 164 YLPLFTQELIWCKL-NENYFHVVLPSLLNSRNVHDNHSTYINKDWLLALLELTSNLNQNF 222

Query: 523 KFTFKSIVLSAIRIKIIDNNFCIKKERN 606
           KF +  + L  +R  +I+N   + K  N
Sbjct: 223 KFEYMKLRLYILRDDLINNGLDLLKNLN 250


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 645,983,717
Number of Sequences: 1657284
Number of extensions: 11324224
Number of successful extensions: 21399
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21394
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79112361923
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)