Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_P03
(896 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81134-8|CAB57908.1| 366|Caenorhabditis elegans Hypothetical pr... 273 1e-73
AL117202-33|CAB55097.1| 366|Caenorhabditis elegans Hypothetical... 273 1e-73
L14745-12|AAR25659.1| 366|Caenorhabditis elegans Hypothetical p... 200 8e-52
Z93385-2|CAB07637.1| 358|Caenorhabditis elegans Hypothetical pr... 59 5e-09
U13875-6|AAK67213.1| 390|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AF036706-10|AAM97948.1| 633|Caenorhabditis elegans Hypothetical... 47 2e-05
AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical ... 47 2e-05
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 34 0.16
Z92773-1|CAB07131.1| 395|Caenorhabditis elegans Hypothetical pr... 33 0.37
AY204203-1|AAO39204.1| 391|Caenorhabditis elegans nuclear recep... 31 0.85
AF016675-6|AAF02171.2| 391|Caenorhabditis elegans Nuclear hormo... 31 0.85
Z49068-9|CAA88860.1| 556|Caenorhabditis elegans Hypothetical pr... 31 1.5
AF003143-4|AAO61427.1| 247|Caenorhabditis elegans Hypothetical ... 31 1.5
AF003143-3|AAL65781.1| 385|Caenorhabditis elegans Hypothetical ... 31 1.5
AF003143-2|AAK68267.2| 554|Caenorhabditis elegans Hypothetical ... 31 1.5
AL021571-4|CAI79270.1| 610|Caenorhabditis elegans Hypothetical ... 30 2.0
AL021571-2|CAA16514.2| 592|Caenorhabditis elegans Hypothetical ... 30 2.0
AL021571-1|CAA16512.2| 651|Caenorhabditis elegans Hypothetical ... 30 2.0
M96145-1|AAA28057.1| 562|Caenorhabditis elegans elastase protein. 29 4.5
AF016680-3|AAB66165.2| 562|Caenorhabditis elegans Abnormal gut ... 29 4.5
>Z81134-8|CAB57908.1| 366|Caenorhabditis elegans Hypothetical
protein T28D6.6 protein.
Length = 366
Score = 273 bits (669), Expect = 1e-73
Identities = 144/226 (63%), Positives = 162/226 (71%)
Frame = +3
Query: 219 TILEKIAAIESEMARTQKNKATALHLGIXXXXXXXXXXELITPKXXXXXXXXXFDVAKTG 398
++L+KIA IE+EMARTQKNKAT HLGI +LITPK FDVAKTG
Sbjct: 2 SVLQKIADIEAEMARTQKNKATNAHLGILKAKLAKLRRDLITPKGGGGGPGEGFDVAKTG 61
Query: 399 DARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLHLPGIIE 578
DARIGFVGFPSVGKSTLL NLAGV+SEVAAYEFTTLTTVPG I+YKGAKIQLL LPGIIE
Sbjct: 62 DARIGFVGFPSVGKSTLLCNLAGVFSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIE 121
Query: 579 GAKDGKGRGRQVIAVARTCSLIFIVLDVXXXXXXXXXXXXXXXXXXXXXNKQPPNIHFRK 758
GAKDGKGRG+QVIAVARTCSLI +VLDV NKQPPNI +++
Sbjct: 122 GAKDGKGRGKQVIAVARTCSLILMVLDVMKPLQHKKLLEYELEGFGIRLNKQPPNIGYKR 181
Query: 759 KDXXWNXX*IQHVLXSELDVXAVKTILSEYKIHNADIXLRYDAXSD 896
K+ V SELD+ VK+IL+EY+IHNADI LRYDA S+
Sbjct: 182 KEKG-GINLTMLVPQSELDLDLVKSILAEYRIHNADITLRYDATSE 226
>AL117202-33|CAB55097.1| 366|Caenorhabditis elegans Hypothetical
protein T28D6.6 protein.
Length = 366
Score = 273 bits (669), Expect = 1e-73
Identities = 144/226 (63%), Positives = 162/226 (71%)
Frame = +3
Query: 219 TILEKIAAIESEMARTQKNKATALHLGIXXXXXXXXXXELITPKXXXXXXXXXFDVAKTG 398
++L+KIA IE+EMARTQKNKAT HLGI +LITPK FDVAKTG
Sbjct: 2 SVLQKIADIEAEMARTQKNKATNAHLGILKAKLAKLRRDLITPKGGGGGPGEGFDVAKTG 61
Query: 399 DARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLHLPGIIE 578
DARIGFVGFPSVGKSTLL NLAGV+SEVAAYEFTTLTTVPG I+YKGAKIQLL LPGIIE
Sbjct: 62 DARIGFVGFPSVGKSTLLCNLAGVFSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIE 121
Query: 579 GAKDGKGRGRQVIAVARTCSLIFIVLDVXXXXXXXXXXXXXXXXXXXXXNKQPPNIHFRK 758
GAKDGKGRG+QVIAVARTCSLI +VLDV NKQPPNI +++
Sbjct: 122 GAKDGKGRGKQVIAVARTCSLILMVLDVMKPLQHKKLLEYELEGFGIRLNKQPPNIGYKR 181
Query: 759 KDXXWNXX*IQHVLXSELDVXAVKTILSEYKIHNADIXLRYDAXSD 896
K+ V SELD+ VK+IL+EY+IHNADI LRYDA S+
Sbjct: 182 KEKG-GINLTMLVPQSELDLDLVKSILAEYRIHNADITLRYDATSE 226
>L14745-12|AAR25659.1| 366|Caenorhabditis elegans Hypothetical
protein C02F5.3 protein.
Length = 366
Score = 200 bits (489), Expect = 8e-52
Identities = 107/225 (47%), Positives = 131/225 (58%)
Frame = +3
Query: 222 ILEKIAAIESEMARTQKNKATALHLGIXXXXXXXXXXELITPKXXXXXXXXXFDVAKTGD 401
ILEKIA IE E++RTQKNKAT HLG+ +L+ P FDV K+GD
Sbjct: 3 ILEKIAEIEHEISRTQKNKATEYHLGLLKAKLAKYRQQLLEPTGKGGAKGEGFDVMKSGD 62
Query: 402 ARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLHLPGIIEG 581
AR+ VGFPSVGKSTLLS++ +SE A YEFTTLT +PG I Y GA IQLL LPGIIEG
Sbjct: 63 ARVAMVGFPSVGKSTLLSSMTSTHSEAAGYEFTTLTCIPGVISYNGANIQLLDLPGIIEG 122
Query: 582 AKDGKGRGRQVIAVARTCSLIFIVLDVXXXXXXXXXXXXXXXXXXXXXNKQPPNIHFRKK 761
A GKGRGRQVI+VA+T LI ++LD NK+PPNI+ ++K
Sbjct: 123 ASQGKGRGRQVISVAKTADLILMMLDAGKSDQQKMLLERELEAVGIRLNKKPPNIYVKQK 182
Query: 762 DXXWNXX*IQHVLXSELDVXAVKTILSEYKIHNADIXLRYDAXSD 896
V + + + T+L EYKI NAD+ R D D
Sbjct: 183 KVG-GVKFTNTVPLTHCNEKLIMTVLHEYKIFNADVIFREDCTVD 226
>Z93385-2|CAB07637.1| 358|Caenorhabditis elegans Hypothetical
protein M01E5.2 protein.
Length = 358
Score = 58.8 bits (136), Expect = 5e-09
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Frame = +3
Query: 378 FDVAKTGDARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKG-AKIQL 554
+DV A G VGFP+ GKS+LL ++ +VA+Y FTTL G + Y+ +I +
Sbjct: 181 YDVEMRVMATAGLVGFPNAGKSSLLRAISRAKPKVASYPFTTLHPHIGVVFYEDFEQIAV 240
Query: 555 LHLPGIIEGAKDGKGRGRQVIAVARTCSLIFIVLD 659
+PG+IE + KG G + C ++ VLD
Sbjct: 241 ADIPGLIEDSHLNKGLGISFLKHIERCESLWYVLD 275
>U13875-6|AAK67213.1| 390|Caenorhabditis elegans Hypothetical
protein C26E6.12 protein.
Length = 390
Score = 50.0 bits (114), Expect = 2e-06
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Frame = +3
Query: 408 IGFVGFPSVGKSTLLSNLAGVYS-EVAAYEFTTLTTVPGCIKYK--------GAKIQLLH 560
IG +GFP+ GKSTLL L S ++A Y FTT+ K K + +
Sbjct: 164 IGLLGFPNAGKSTLLKALVPEKSVKIADYAFTTVNPQVAFFKNKEEFSVEDPSFTLSIAD 223
Query: 561 LPGIIEGAKDGKGRGRQVIAVARTCSLIFIVLD 659
LPGIIEGA +G+G + + ++ +V+D
Sbjct: 224 LPGIIEGASMNRGKGYKFLKHLEYADIVVMVVD 256
>AF036706-10|AAM97948.1| 633|Caenorhabditis elegans Hypothetical
protein T07A9.9b protein.
Length = 633
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Frame = +3
Query: 420 GFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLHLPGIIEGAKDGKG 599
GFP+VGKS+ ++N+ EV Y FTT G + Y+ + Q++ PGI++ + +
Sbjct: 176 GFPNVGKSSFINNVTRADVEVQPYAFTTKALYVGHLDYRFLRWQVIDTPGILDQPLEDRN 235
Query: 600 --RGRQVIAVARTCSLIFIVLDV 662
+ V A+A + + ++DV
Sbjct: 236 TIEMQAVTALAHLKASVLFMMDV 258
>AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical
protein T07A9.9a protein.
Length = 681
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Frame = +3
Query: 420 GFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLHLPGIIEGAKDGKG 599
GFP+VGKS+ ++N+ EV Y FTT G + Y+ + Q++ PGI++ + +
Sbjct: 176 GFPNVGKSSFINNVTRADVEVQPYAFTTKALYVGHLDYRFLRWQVIDTPGILDQPLEDRN 235
Query: 600 --RGRQVIAVARTCSLIFIVLDV 662
+ V A+A + + ++DV
Sbjct: 236 TIEMQAVTALAHLKASVLFMMDV 258
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 33.9 bits (74), Expect = 0.16
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Frame = -2
Query: 613 TCRPLPFPSFAPSIIPGRCS------SCILAPLYLMQPGTVVSVVNSYAATSEYTPAKLE 452
T P+P +FA S S + LAPL P TV S S+++TSE +
Sbjct: 1352 TSSPIPSTTFASSTSGSTISDVSSVSTTSLAPLSSSLPSTVPSSTQSFSSTSEGSSKASS 1411
Query: 451 SKVDFPTEGKPTKP 410
S V T PT P
Sbjct: 1412 SPVPSQTSSTPTNP 1425
>Z92773-1|CAB07131.1| 395|Caenorhabditis elegans Hypothetical
protein W08E3.3 protein.
Length = 395
Score = 32.7 bits (71), Expect = 0.37
Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 17/98 (17%)
Frame = +3
Query: 405 RIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCI------------KYKGAK- 545
++G +G P+VGKST + L ++ + F T+ + YK A
Sbjct: 23 KVGILGLPNVGKSTFFNVLTKSEAQAENFPFCTIDPNESRVAVQDDRFDWLVNHYKPASK 82
Query: 546 ----IQLLHLPGIIEGAKDGKGRGRQVIAVARTCSLIF 647
+ + + G+++GA +G+G G ++ C +F
Sbjct: 83 VPAFLNVTDIAGLVKGASEGQGLGNAFLSHVSACDALF 120
>AY204203-1|AAO39204.1| 391|Caenorhabditis elegans nuclear receptor
NHR-115 protein.
Length = 391
Score = 31.5 bits (68), Expect = 0.85
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = -1
Query: 659 IKYYKYKTACSSYSYYLPTSTFSVFRSFNNTWQM*QLYLSTLVFDAARYCSQCCE 495
I K+ S SYY+ F +F N T Q + + LVF+ +RY CE
Sbjct: 82 ISAIKHPKIFPSVSYYVGRPEFLMFSDSNVTSQKTFIDVQNLVFEVSRYLDHGCE 136
>AF016675-6|AAF02171.2| 391|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 115 protein.
Length = 391
Score = 31.5 bits (68), Expect = 0.85
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = -1
Query: 659 IKYYKYKTACSSYSYYLPTSTFSVFRSFNNTWQM*QLYLSTLVFDAARYCSQCCE 495
I K+ S SYY+ F +F N T Q + + LVF+ +RY CE
Sbjct: 82 ISAIKHPKIFPSVSYYVGRPEFLMFSDSNVTSQKTFIDVQNLVFEVSRYLDHGCE 136
>Z49068-9|CAA88860.1| 556|Caenorhabditis elegans Hypothetical
protein K01C8.9 protein.
Length = 556
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/19 (57%), Positives = 18/19 (94%)
Frame = +3
Query: 405 RIGFVGFPSVGKSTLLSNL 461
R+G VGFP+VGKS+++++L
Sbjct: 261 RVGVVGFPNVGKSSVINSL 279
>AF003143-4|AAO61427.1| 247|Caenorhabditis elegans Hypothetical
protein C53H9.2c protein.
Length = 247
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 408 IGFVGFPSVGKSTLLSNLAG 467
+G VG+P+VGKS+ ++ LAG
Sbjct: 132 VGMVGYPNVGKSSTINKLAG 151
>AF003143-3|AAL65781.1| 385|Caenorhabditis elegans Hypothetical
protein C53H9.2b protein.
Length = 385
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 408 IGFVGFPSVGKSTLLSNLAG 467
+G VG+P+VGKS+ ++ LAG
Sbjct: 132 VGMVGYPNVGKSSTINKLAG 151
>AF003143-2|AAK68267.2| 554|Caenorhabditis elegans Hypothetical
protein C53H9.2a protein.
Length = 554
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3
Query: 408 IGFVGFPSVGKSTLLSNLAG 467
+G VG+P+VGKS+ ++ LAG
Sbjct: 301 VGMVGYPNVGKSSTINKLAG 320
>AL021571-4|CAI79270.1| 610|Caenorhabditis elegans Hypothetical
protein T19A6.2c protein.
Length = 610
Score = 30.3 bits (65), Expect = 2.0
Identities = 10/18 (55%), Positives = 17/18 (94%)
Frame = +3
Query: 408 IGFVGFPSVGKSTLLSNL 461
+GF+G+P+VGKS+L++ L
Sbjct: 328 VGFIGYPNVGKSSLVNTL 345
>AL021571-2|CAA16514.2| 592|Caenorhabditis elegans Hypothetical
protein T19A6.2b protein.
Length = 592
Score = 30.3 bits (65), Expect = 2.0
Identities = 10/18 (55%), Positives = 17/18 (94%)
Frame = +3
Query: 408 IGFVGFPSVGKSTLLSNL 461
+GF+G+P+VGKS+L++ L
Sbjct: 269 VGFIGYPNVGKSSLVNTL 286
>AL021571-1|CAA16512.2| 651|Caenorhabditis elegans Hypothetical
protein T19A6.2a protein.
Length = 651
Score = 30.3 bits (65), Expect = 2.0
Identities = 10/18 (55%), Positives = 17/18 (94%)
Frame = +3
Query: 408 IGFVGFPSVGKSTLLSNL 461
+GF+G+P+VGKS+L++ L
Sbjct: 328 VGFIGYPNVGKSSLVNTL 345
>M96145-1|AAA28057.1| 562|Caenorhabditis elegans elastase protein.
Length = 562
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 384 VAKTGDARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEF 497
+ T R+GF+GF S G S + N G++ + AA EF
Sbjct: 141 IVATVQYRLGFMGFFSEGTSDVQGNW-GLFDQAAALEF 177
>AF016680-3|AAB66165.2| 562|Caenorhabditis elegans Abnormal gut
esterase protein 1 protein.
Length = 562
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 384 VAKTGDARIGFVGFPSVGKSTLLSNLAGVYSEVAAYEF 497
+ T R+GF+GF S G S + N G++ + AA EF
Sbjct: 141 IVATVQYRLGFMGFFSEGTSDVQGNW-GLFDQAAALEF 177
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,995,562
Number of Sequences: 27780
Number of extensions: 368563
Number of successful extensions: 1108
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1099
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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