Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_P01
         (888 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0695 + 5730932-5731198                                           33   0.40 
06_01_0185 - 1437693-1437834,1437969-1438078,1438214-1438264,143...    30   2.8  
06_03_0478 - 21259376-21259465,21259862-21259924,21260025-212600...    29   4.9  
05_04_0286 + 19833114-19834053,19834149-19834165                       29   4.9  
02_02_0170 + 7395480-7395917                                           29   6.5  
05_06_0051 - 25190803-25191216,25191301-25191891,25193248-251933...    28   8.6  
02_04_0381 - 22497519-22497769,22498157-22498247                       28   8.6  

>11_01_0695 + 5730932-5731198
          Length = 88

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
 Frame = +3

Query: 342 PADLQLLQDVGKRACVRRGGNCDHRPGDCCHSSSCRCNL---WGSNC 473
           P  + ++    K AC+  GG C  RP DCC +  C   +   +GS C
Sbjct: 40  PRLMDVVSAESKLACLPAGGFCMFRPMDCCGNCGCLYPVGVCYGSRC 86


>06_01_0185 - 1437693-1437834,1437969-1438078,1438214-1438264,
            1438877-1439122,1439244-1439315,1439614-1439648,
            1439755-1439845,1440546-1440610,1440733-1440813,
            1441020-1441137,1441535-1441627,1441865-1441997,
            1442471-1442503,1443264-1443343,1443444-1443549,
            1443621-1443795,1443884-1443980,1444819-1445251,
            1445329-1445459,1446052-1446341,1446429-1447002
          Length = 1051

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = -1

Query: 657  GXCEGIERENKNATGPFCVGECCGFRWSGGQ--VGWLELVAASEELRS 520
            G C G  +ENKN T PF       + WSG +    ++E +  S+E  S
Sbjct: 888  GSCSGENKENKNNTSPF-----SSYSWSGQRKVPSYIEKIVFSQEFIS 930


>06_03_0478 - 21259376-21259465,21259862-21259924,21260025-21260066,
            21260180-21260461,21261084-21261587,21261973-21261981,
            21262122-21262196,21262375-21262449,21262557-21263494,
            21263577-21263607,21263694-21263979,21264691-21264905,
            21265329-21265437,21265556-21265611,21265730-21265822,
            21266348-21266393,21266496-21267221,21267489-21267550,
            21267738-21268013,21268604-21268735,21268835-21268909
          Length = 1394

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = +3

Query: 285  YIDP-GDDDLEVNLPDYGEDPADLQLLQD 368
            +++P  D+ +E   PDY EDP +++L +D
Sbjct: 1193 HVEPVADEKMEDEEPDYEEDPEEVELYED 1221


>05_04_0286 + 19833114-19834053,19834149-19834165
          Length = 318

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 14/33 (42%), Positives = 14/33 (42%)
 Frame = +3

Query: 381 ACVRRGGNCDHRPGDCCHSSSCRCNLWGSNCRC 479
           AC   GG C H  GD  H   C C  W S   C
Sbjct: 254 ACRATGGVCGH-DGDS-HGDLCLCGDWNSTSNC 284


>02_02_0170 + 7395480-7395917
          Length = 145

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
 Frame = -1

Query: 651 CEGIERENKNATGPF--CVGEC-CGFRWSGGQVGWLELVAASEELRSLSPTPTSGRA 490
           C G  R  +   G    C G   CG RW   Q G +E V A+E   + +   T+ RA
Sbjct: 3   CGGWVRPRRRVAGGGVRCRGTIGCGRRWQAQQRGRIEAVTAAEAWEATTAGATAARA 59


>05_06_0051 -
           25190803-25191216,25191301-25191891,25193248-25193317,
           25193392-25193443,25195368-25195440,25195557-25195646
          Length = 429

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +2

Query: 551 SSQPT*PPLHRKPQHSP 601
           +S P  PPLHR P+H P
Sbjct: 167 ASPPVPPPLHRNPRHRP 183


>02_04_0381 - 22497519-22497769,22498157-22498247
          Length = 113

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 6/66 (9%)
 Frame = +3

Query: 294 PGDDDLEVNLPDYGEDPADLQLLQDVGKRACVRRGGNCDHRPGDCCH------SSSCRCN 455
           P  +D   + PD+ ++P         GK    +  G CD   GDC H        SC C+
Sbjct: 46  PDHEDPSPSPPDHEDEPPPPS---SPGKEDVCKGKGCCDWSGGDCKHYCDGYDDKSC-CD 101

Query: 456 LWGSNC 473
            W  +C
Sbjct: 102 DWSGDC 107


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,741,012
Number of Sequences: 37544
Number of extensions: 315176
Number of successful extensions: 951
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 950
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)