Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_O23
(952 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.17
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.17
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.17
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 25 0.51
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 27 0.58
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 26 0.62
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 26 0.62
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 26 0.62
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 26 0.62
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 31 0.92
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 31 1.6
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 2.1
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 2.1
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 30 2.1
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 26 2.6
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 3.7
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 3.7
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 3.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 3.7
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 3.7
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 3.7
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 29 3.7
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.9
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.9
AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical ... 29 4.9
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 4.9
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 28 8.5
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 26 9.3
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 24 9.5
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 24 9.6
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.9 bits (74), Expect = 0.17
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -3
Query: 566 PPPRGGXXFFXXXXPPXPPPPPXGXXXXPP 477
PPP GG PP PPPPP G PP
Sbjct: 745 PPPPGGLPPISGGPPP-PPPPPGGCPPPPP 773
Score = 32.7 bits (71), Expect = 0.40
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -3
Query: 566 PPPRGGXXFFXXXXPPXPPPPPXGXXXXPP 477
PPP GG PP PPPPP G PP
Sbjct: 762 PPPPGGCP------PPPPPPPPGGFKGGPP 785
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Frame = -3
Query: 566 PPPRGGXXFFXXXXPPXPPP---PPXGXXXXPPXXXXFFXPP 450
PPP GG PP PPP PP PP PP
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.9 bits (74), Expect = 0.17
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -3
Query: 566 PPPRGGXXFFXXXXPPXPPPPPXGXXXXPP 477
PPP GG PP PPPPP G PP
Sbjct: 745 PPPPGGLPPISGGPPP-PPPPPGGCPPPPP 773
Score = 32.7 bits (71), Expect = 0.40
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -3
Query: 566 PPPRGGXXFFXXXXPPXPPPPPXGXXXXPP 477
PPP GG PP PPPPP G PP
Sbjct: 762 PPPPGGCP------PPPPPPPPGGFKGGPP 785
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Frame = -3
Query: 566 PPPRGGXXFFXXXXPPXPPP---PPXGXXXXPPXXXXFFXPP 450
PPP GG PP PPP PP PP PP
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.9 bits (74), Expect = 0.17
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -3
Query: 566 PPPRGGXXFFXXXXPPXPPPPPXGXXXXPP 477
PPP GG PP PPPPP G PP
Sbjct: 328 PPPPGGLPPISGGPPP-PPPPPGGCPPPPP 356
Score = 32.7 bits (71), Expect = 0.40
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -3
Query: 566 PPPRGGXXFFXXXXPPXPPPPPXGXXXXPP 477
PPP GG PP PPPPP G PP
Sbjct: 345 PPPPGGCP------PPPPPPPPGGFKGGPP 368
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Frame = -3
Query: 566 PPPRGGXXFFXXXXPPXPPP---PPXGXXXXPPXXXXFFXPP 450
PPP GG PP PPP PP PP PP
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 353
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 25.4 bits (53), Expect(2) = 0.51
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -3
Query: 566 PPPRGGXXFFXXXXPPXPPPPP 501
PPP G P PPPPP
Sbjct: 544 PPPIAGLLAANGTNVPIPPPPP 565
Score = 25.4 bits (53), Expect(2) = 0.51
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -3
Query: 524 PPXPPPPPXG 495
PP PPPPP G
Sbjct: 589 PPPPPPPPGG 598
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 27.5 bits (58), Expect(2) = 0.58
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = -3
Query: 524 PPXPPPPPXGXXXXPPXXXXFFXP 453
PP PPPPP PP + P
Sbjct: 63 PPPPPPPPPPMCPPPPPPMPSYSP 86
Score = 23.4 bits (48), Expect(2) = 0.58
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -3
Query: 566 PPPRGGXXFFXXXXPPXPPPPP 501
PPP F P PPPPP
Sbjct: 46 PPPPICPPQFCPPPPMCPPPPP 67
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 25.8 bits (54), Expect(2) = 0.62
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3
Query: 495 PXGGGGGGGG 524
P GGGGGGGG
Sbjct: 336 PGGGGGGGGG 345
Score = 24.6 bits (51), Expect(2) = 0.62
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 501 GGGGGGGGXXXXKKXXPPP 557
GGGGGGGG P P
Sbjct: 337 GGGGGGGGGLDPFTFPPTP 355
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 25.8 bits (54), Expect(2) = 0.62
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3
Query: 495 PXGGGGGGGG 524
P GGGGGGGG
Sbjct: 336 PGGGGGGGGG 345
Score = 24.6 bits (51), Expect(2) = 0.62
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 501 GGGGGGGGXXXXKKXXPPP 557
GGGGGGGG P P
Sbjct: 337 GGGGGGGGGLDPFTFPPTP 355
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 25.8 bits (54), Expect(2) = 0.62
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3
Query: 495 PXGGGGGGGG 524
P GGGGGGGG
Sbjct: 336 PGGGGGGGGG 345
Score = 24.6 bits (51), Expect(2) = 0.62
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 501 GGGGGGGGXXXXKKXXPPP 557
GGGGGGGG P P
Sbjct: 337 GGGGGGGGGLDPFTFPPTP 355
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 25.8 bits (54), Expect(2) = 0.62
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3
Query: 495 PXGGGGGGGG 524
P GGGGGGGG
Sbjct: 336 PGGGGGGGGG 345
Score = 24.6 bits (51), Expect(2) = 0.62
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 501 GGGGGGGGXXXXKKXXPPP 557
GGGGGGGG P P
Sbjct: 337 GGGGGGGGGLDPFTFPPTP 355
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 31.5 bits (68), Expect = 0.92
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +3
Query: 795 PPKKTPXGPXKXSPSXXGPXEPPGXLPXFXXPRGXTGXXWXNP 923
P K +P GP PS GP P G P P G T W +P
Sbjct: 999 PVKPSPSGPSPNGPSPNGP-SPNGPSPNGPSPNGPT-PNWPSP 1039
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +3
Query: 480 GXXXXPXGGGGGGGGXXXXKKXXPPPGXXG 569
G P GGGGGGGG PPG G
Sbjct: 84 GGYAQPQGGGGGGGGQCSTCCRPGPPGAGG 113
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 566 PPPRGGXXFFXXXXPPXPPPPPXG 495
PPP G PP PPPPP G
Sbjct: 636 PPPMGLPAVGAGAPPPPPPPPPSG 659
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -3
Query: 566 PPPRGGXXFFXXXXPPXPPPPPXGXXXXP 480
PPP G PP PPPPP P
Sbjct: 635 PPPPMGLPAVGAGAPPPPPPPPPSGAGGP 663
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 566 PPPRGGXXFFXXXXPPXPPPPPXG 495
PPP G PP PPPPP G
Sbjct: 462 PPPMGLPAVGAGAPPPPPPPPPSG 485
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -3
Query: 566 PPPRGGXXFFXXXXPPXPPPPPXGXXXXP 480
PPP G PP PPPPP P
Sbjct: 461 PPPPMGLPAVGAGAPPPPPPPPPSGAGGP 489
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 563 PPRGGXXFFXXXXPPXPPPPP 501
PP G F PP PPPPP
Sbjct: 427 PPHHGHHHFPPFWPPCPPPPP 447
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 25.8 bits (54), Expect(2) = 2.6
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 477 GGXXXXPXGGGGGGGG 524
GG GGGGGGGG
Sbjct: 103 GGGGGYAAGGGGGGGG 118
Score = 22.6 bits (46), Expect(2) = 2.6
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 501 GGGGGGGGXXXXKKXXPPPGXXG 569
GGGGGGG + P G G
Sbjct: 118 GGGGGGGCHCAAQASGCPAGPPG 140
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = -3
Query: 566 PPPRGGXXFFXXXXPPXPPP-PPXGXXXXPP 477
PPP GG P PPP PP G PP
Sbjct: 219 PPPIGGIAPVNAHGAPPPPPLPPVGAGAPPP 249
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 566 PPPRGGXXFFXXXXPPXPPPPPXG 495
PPP GG P PPPPP G
Sbjct: 282 PPPAGGSPPPPRAGSPPPPPPPRG 305
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/43 (34%), Positives = 16/43 (37%), Gaps = 4/43 (9%)
Frame = -3
Query: 566 PPPRGGXXFFXXXXPPXPP----PPPXGXXXXPPXXXXFFXPP 450
PPP+G PP PP PPP PP PP
Sbjct: 241 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 283
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Frame = -3
Query: 566 PPPRGGXXFFXXXXPPX--PPPPPXGXXXXPPXXXXFFXPP 450
PPPR G PP PPPPP G PP PP
Sbjct: 265 PPPRTGSP----PPPPTGSPPPPPAGGSPPPPRAGSPPPPP 301
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 566 PPPRGGXXFFXXXXPPXPPPPPXG 495
PPP GG P PPPPP G
Sbjct: 303 PPPAGGSPPPPRAGSPPPPPPPRG 326
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/43 (34%), Positives = 16/43 (37%), Gaps = 4/43 (9%)
Frame = -3
Query: 566 PPPRGGXXFFXXXXPPXPP----PPPXGXXXXPPXXXXFFXPP 450
PPP+G PP PP PPP PP PP
Sbjct: 262 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 304
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Frame = -3
Query: 566 PPPRGGXXFFXXXXPPX--PPPPPXGXXXXPPXXXXFFXPP 450
PPPR G PP PPPPP G PP PP
Sbjct: 286 PPPRTGSP----PPPPTGSPPPPPAGGSPPPPRAGSPPPPP 322
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 566 PPPRGGXXFFXXXXPPXPPPPPXG 495
PPP GG P PPPPP G
Sbjct: 288 PPPAGGSPPPPRAGSPPPPPPPRG 311
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/43 (34%), Positives = 16/43 (37%), Gaps = 4/43 (9%)
Frame = -3
Query: 566 PPPRGGXXFFXXXXPPXPP----PPPXGXXXXPPXXXXFFXPP 450
PPP+G PP PP PPP PP PP
Sbjct: 247 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 289
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Frame = -3
Query: 566 PPPRGGXXFFXXXXPPX--PPPPPXGXXXXPPXXXXFFXPP 450
PPPR G PP PPPPP G PP PP
Sbjct: 271 PPPRTGSP----PPPPTGSPPPPPAGGSPPPPRAGSPPPPP 307
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = -3
Query: 566 PPPRGGXXFFXXXXPPXPPP-PPXGXXXXPP 477
PPP GG P PPP PP G PP
Sbjct: 205 PPPIGGIAPVNAHGAPPPPPLPPVGAGAPPP 235
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = -3
Query: 566 PPPRGGXXFFXXXXPPXPPP-PPXGXXXXPP 477
PPP GG P PPP PP G PP
Sbjct: 205 PPPIGGIAPVNAHGAPPPPPLPPVGAGAPPP 235
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 795 PPKKTPXGPXKXSPSXXGPXEPPGXLP 875
PPK+ P + PS GP +PP LP
Sbjct: 347 PPKEENLPPIEPLPSVAGPYQPPRTLP 373
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -3
Query: 566 PPPRGGXXFFXXXXPPXPPPPPXGXXXXPPXXXXFFXPP 450
PPP G P PPPPP G PP PP
Sbjct: 289 PPPSSGMW-------PPPPPPPPGRTPGPPGMPGMPPPP 320
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/33 (39%), Positives = 14/33 (42%), Gaps = 3/33 (9%)
Frame = -3
Query: 566 PPPR---GGXXFFXXXXPPXPPPPPXGXXXXPP 477
PPPR G + P PP PP G PP
Sbjct: 351 PPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPP 383
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -3
Query: 566 PPPRGGXXFFXXXXPPXPPPPPXGXXXXPPXXXXFFXPP 450
PPP G P PPPPP G PP PP
Sbjct: 299 PPPSSGMW-------PPPPPPPPGRTPGPPGMPGMPPPP 330
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/33 (39%), Positives = 14/33 (42%), Gaps = 3/33 (9%)
Frame = -3
Query: 566 PPPR---GGXXFFXXXXPPXPPPPPXGXXXXPP 477
PPPR G + P PP PP G PP
Sbjct: 361 PPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPP 393
>AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical
protein Y48B6A.3 protein.
Length = 892
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 438 KKKXGGXKKXXXXGGXXXXPXGGGGGGGG 524
+++ GG + GG GGGGGGGG
Sbjct: 820 QQRQGGYQGGGYGGGYGGGGGGGGGGGGG 848
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -3
Query: 566 PPPRGGXXFFXXXXPPXPPPPPXGXXXXPP 477
PPP PP PPPPP PP
Sbjct: 70 PPPPPPLISILQQAPPPPPPPPPPTLKAPP 99
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -3
Query: 566 PPPRGGXXFFXXXXPPXPPPPPXGXXXXPP 477
PPP PP PPPPP PP
Sbjct: 71 PPPPPLISILQQAPPPPPPPPPPTLKAPPP 100
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +3
Query: 450 GGXKKXXXXGGXXXXPXGGGGGGGGXXXXKKXXPPPGXXG 569
GG GG GG GGGGG PPP G
Sbjct: 80 GGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACG 119
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -3
Query: 566 PPPRGGXXFFXXXXPPXPPPPPXGXXXXPP 477
PPP G P PPPPP G P
Sbjct: 522 PPPMPGMAPLSTGAPTPPPPPPVGMANGGP 551
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 25.8 bits (54), Expect(2) = 9.3
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -3
Query: 578 KKKXPPPRGGXXFFXXXXPPXPPPPP 501
K PPP PP PPPPP
Sbjct: 494 KSPPPPPPLPPIATPSSVPPPPPPPP 519
Score = 20.6 bits (41), Expect(2) = 9.3
Identities = 8/22 (36%), Positives = 8/22 (36%)
Frame = -3
Query: 515 PPPPPXGXXXXPPXXXXFFXPP 450
PPPPP P PP
Sbjct: 512 PPPPPPPPPPPPALEQEISGPP 533
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 24.2 bits (50), Expect(2) = 9.5
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -3
Query: 554 GGXXFFXXXXPPXPPPPP 501
GG PP PPPPP
Sbjct: 53 GGSYAAAPALPPPPPPPP 70
Score = 22.2 bits (45), Expect(2) = 9.5
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -3
Query: 524 PPXPPPPPXG 495
PP PPP P G
Sbjct: 65 PPPPPPAPIG 74
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 24.2 bits (50), Expect(2) = 9.6
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -3
Query: 554 GGXXFFXXXXPPXPPPPP 501
GG PP PPPPP
Sbjct: 53 GGSYAAAPALPPPPPPPP 70
Score = 22.2 bits (45), Expect(2) = 9.6
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -3
Query: 524 PPXPPPPPXG 495
PP PPP P G
Sbjct: 65 PPPPPPAPIG 74
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,252,410
Number of Sequences: 27780
Number of extensions: 284155
Number of successful extensions: 2660
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1864
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2465154230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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