Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_O20
         (911 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0234 + 15187065-15188241,15188316-15188494                       51   1e-06
04_03_0649 - 18402976-18403220,18403305-18404499                       40   0.002
10_08_0009 + 14075929-14076789                                         33   0.31 
03_01_0489 - 3709709-3709864,3710166-3710318,3710408-3710626           30   2.9  
03_05_0064 - 20385290-20385346,20385452-20387133,20387266-203880...    29   5.1  
01_01_1024 + 8083372-8083758,8083970-8084149,8084261-8084590,808...    29   6.8  
04_03_0604 - 17916482-17917659,17918121-17918291,17919015-17919966     28   9.0  

>11_04_0234 + 15187065-15188241,15188316-15188494
          Length = 451

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
 Frame = +3

Query: 375 TSLKAKYPGLTV--LLSVGGDADTEEPEK--YNLLLESQQARTAFINSGVLLAEQYGFDG 542
           +S+K+   G  V  +LS+G D   E+     ++ +   +  R AFINS + LA   GFDG
Sbjct: 98  SSIKSSGGGFAVKTILSIGTDEFREDVSNAAFSRMASEKNLRRAFINSSIELARANGFDG 157

Query: 543 IDLAWQFP 566
           +DLAW+FP
Sbjct: 158 LDLAWRFP 165


>04_03_0649 - 18402976-18403220,18403305-18404499
          Length = 479

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 15/28 (53%), Positives = 22/28 (78%)
 Frame = +3

Query: 483 ARTAFINSGVLLAEQYGFDGIDLAWQFP 566
           +R AFI + V +A + GFDG+D+AW+FP
Sbjct: 143 SRAAFIGAAVKVARENGFDGLDVAWRFP 170


>10_08_0009 + 14075929-14076789
          Length = 286

 Score = 33.1 bits (72), Expect = 0.31
 Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
 Frame = +3

Query: 369 AITSLKAKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVL----LAEQYGF 536
           A+ + KA +P L+V+L++GGD  T +    N       +  A++ +       L + YG 
Sbjct: 70  AVAAAKAAHPNLSVILALGGD--TVQNTGVNATFAPTSSVDAWVRNAADSVSGLIDAYGL 127

Query: 537 DGIDLAWQ 560
           DG+D+ ++
Sbjct: 128 DGVDVDYE 135


>03_01_0489 - 3709709-3709864,3710166-3710318,3710408-3710626
          Length = 175

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +1

Query: 184 LRTAGAMSEXLKPACCRWTSNPALSFCTHLLYGYAG 291
           LR A  +    +PACCR  S+P + F T    G AG
Sbjct: 4   LRAAPGLPFSPRPACCRPPSSPGVQFFTPASAGGAG 39


>03_05_0064 - 20385290-20385346,20385452-20387133,20387266-20388083,
            20388184-20388303,20389036-20389305,20390094-20390269
          Length = 1040

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 19/91 (20%), Positives = 34/91 (37%)
 Frame = -1

Query: 785  IIXVRICINTAXQSPPSCILGFVIRACFNSRTRAVNLSRGXKFLXIDWRGAECLLNSMPK 606
            ++ V  C N    + P  +             + VNLS G  F  I W   +C +  + +
Sbjct: 739  VVNVSACSNQDSDTTPCGVTKLDKGTANKFLEKPVNLSTGSNFRVIQWGAVDCNIVRIKQ 798

Query: 605  RSPGRADXXRLNSWELPGEVNSIETILFSQQ 513
             +   AD  +    +  GE +    +  +QQ
Sbjct: 799  ENSQHADSEQDTHHKESGEPSQALKVASNQQ 829


>01_01_1024 +
           8083372-8083758,8083970-8084149,8084261-8084590,
           8084679-8084792,8084942-8085682
          Length = 583

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
 Frame = -1

Query: 236 QRQHAGLRXSDIAPAVRSNKVL----CCWVTAGRALARAKSPTRARKSCMIAVGC 84
           Q Q A +R + ++   RS   +    C W   G+ +A+     RA   C +A GC
Sbjct: 278 QAQDANMRKARVSVRARSEAPIIADGCQWRKYGQKMAKGNPCPRAYYRCTMATGC 332


>04_03_0604 - 17916482-17917659,17918121-17918291,17919015-17919966
          Length = 766

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = -3

Query: 399 QGTWLSSW*SHGSCRVFGLCPGXSFKGHQLIGVRLDTGIAVQQV 268
           QG  L+S  ++GSC   G C     +G +   VR DTG    ++
Sbjct: 174 QGGDLTSLATNGSCSGIGCCQTAIPRGLKYYRVRFDTGFNTSEI 217


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,890,232
Number of Sequences: 37544
Number of extensions: 383829
Number of successful extensions: 971
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 971
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)