Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_O20
         (911 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    23   5.1  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        22   6.7  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   8.9  

>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -2

Query: 412 NTVRPGYLAFKLVIAR*LSCVRS 344
           N  RP YLA K  +     C+RS
Sbjct: 155 NRNRPAYLASKCALTTLTDCLRS 177


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 14/54 (25%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
 Frame = -3

Query: 792 PVYHXSAHLY*YCKXVTPELHFRLCDKGLFQFTNKGSXPFTGXQI--PXHRLAW 637
           P  +   + Y YC  +TP      C+    Q  +K S  F    +  P   L W
Sbjct: 209 PAANWGYYAYPYCYNLTPNQPSAQCEATTMQENDKMSWLFESEDVLLPSVYLRW 262


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -1

Query: 704 FNSRTRAVNLSRGXKFLXIDWRGAECL 624
           F S T +  LSR  KF+ + W  A CL
Sbjct: 160 FISHTMS-KLSRAVKFIIVIWLLALCL 185


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,446
Number of Sequences: 438
Number of extensions: 4143
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29630055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)