Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_O16
(985 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1771 - 29404972-29405175,29405282-29405677 25 1.1
05_01_0356 + 2785410-2785670,2785843-2785960,2786800-2786891,278... 31 1.4
06_03_0750 - 24140988-24141037,24141108-24141345,24142158-241422... 25 1.9
03_06_0758 - 36052261-36052301,36052463-36052697,36052895-360529... 25 3.1
05_04_0011 + 17139322-17139451,17139552-17140174 24 3.2
04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585 30 3.3
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 24 3.7
04_04_0137 - 23053148-23053798,23053911-23054146,23054268-230544... 24 3.7
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996... 29 4.3
07_03_1483 + 26881032-26882035,26882130-26882204,26882324-268828... 29 4.3
02_05_0686 - 30900748-30902167,30903442-30904742 29 4.3
05_07_0031 - 27183252-27183317,27183542-27184282 24 5.3
06_03_0082 + 16363742-16364632 29 7.5
05_05_0233 + 23496405-23496932,23497346-23497621,23497747-23497938 29 7.5
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 25 7.8
>07_03_1771 - 29404972-29405175,29405282-29405677
Length = 199
Score = 25.4 bits (53), Expect(2) = 1.1
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1
Query: 766 KKPXPPPPPP 737
K P PPPPPP
Sbjct: 12 KSPLPPPPPP 21
Score = 24.6 bits (51), Expect(2) = 1.1
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -1
Query: 760 PXPPPPPPXXXXKXKXK 710
P PPPPPP K K
Sbjct: 17 PPPPPPPPPLPPAHKDK 33
>05_01_0356 +
2785410-2785670,2785843-2785960,2786800-2786891,
2787114-2787176,2787299-2787397,2787726-2787884,
2788420-2788491,2788567-2788699,2788813-2788877,
2789016-2789091,2789236-2789337,2789524-2789716,
2790576-2790654,2792939-2793007,2793261-2793311,
2793680-2793742,2793926-2794041,2794263-2794347,
2794898-2794957,2795594-2795639,2796011-2796084,
2796350-2796400,2796474-2796674,2796747-2796791,
2797063-2797156,2797226-2797371,2797510-2797739,
2798136-2798196,2798290-2798347,2799020-2799513
Length = 1151
Score = 31.1 bits (67), Expect = 1.4
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -2
Query: 294 REVSVLFVQSHELGSSRHGELVSAGT--RRHGDRSCCLASHHQRDCHAVVVDLFQ 136
+E S++F Q+ G G+ + A R+ + CC+ASH + + +DL Q
Sbjct: 624 KEFSLIFSQAPNRGGKAPGDSLDAQRWWNRYVEAQCCIASHDYKGGLDIYLDLMQ 678
>06_03_0750 -
24140988-24141037,24141108-24141345,24142158-24142232,
24142345-24142413,24142550-24142581,24143503-24143583,
24143791-24143851,24144135-24144275,24144372-24144563
Length = 312
Score = 25.4 bits (53), Expect(2) = 1.9
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -1
Query: 760 PXPPPPPPXXXXKXK 716
P PPPPPP K K
Sbjct: 44 PPPPPPPPSSSSKRK 58
Score = 23.8 bits (49), Expect(2) = 1.9
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -1
Query: 778 FNXXKKPXPPPPPP 737
F P PPPPPP
Sbjct: 35 FASPSPPSPPPPPP 48
>03_06_0758 -
36052261-36052301,36052463-36052697,36052895-36052966,
36056477-36056567,36056650-36056872,36056964-36057300,
36057406-36057588
Length = 393
Score = 25.0 bits (52), Expect(2) = 3.1
Identities = 14/56 (25%), Positives = 16/56 (28%)
Frame = -1
Query: 655 PXXXXXGXPXFXPXKKXXFXPPXXXXGXVPXPXXXFXXIXGXPXXPPPKXXNPXPP 488
P P F P F P + P I PPP+ P PP
Sbjct: 147 PPPMAVAPPPFLPPPLRPFAAPLLFHHDMASPVSPVSPIYYVGPPPPPEALRPLPP 202
Score = 23.4 bits (48), Expect(2) = 3.1
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 760 PXPPPPPP 737
P PPPPPP
Sbjct: 142 PPPPPPPP 149
>05_04_0011 + 17139322-17139451,17139552-17140174
Length = 250
Score = 23.8 bits (49), Expect(3) = 3.2
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 763 KPXPPPPPP 737
+P PPPPPP
Sbjct: 102 QPPPPPPPP 110
Score = 22.2 bits (45), Expect(3) = 3.2
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -1
Query: 775 NXXKKPXPPPPP 740
N + P PPPPP
Sbjct: 63 NEFQPPPPPPPP 74
Score = 20.6 bits (41), Expect(3) = 3.2
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = -1
Query: 760 PXPPPPPPXXXXK 722
P PPPP P K
Sbjct: 105 PPPPPPSPPNGGK 117
>04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585
Length = 268
Score = 29.9 bits (64), Expect = 3.3
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -1
Query: 829 PKKXKXPXXPXGXGXXFFNXXKKPXPPPPPP 737
P K P P G F K P PPPPPP
Sbjct: 193 PPKEPEPPKPCGCSHAFVCVCK-PAPPPPPP 222
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 24.2 bits (50), Expect(2) = 3.7
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 775 NXXKKPXPPPPPP 737
N P PPPPPP
Sbjct: 347 NAPPPPPPPPPPP 359
Score = 23.8 bits (49), Expect(2) = 3.7
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 760 PXPPPPPPXXXXK 722
P PPPPPP K
Sbjct: 354 PPPPPPPPPPPPK 366
>04_04_0137 -
23053148-23053798,23053911-23054146,23054268-23054458,
23054587-23056010
Length = 833
Score = 24.2 bits (50), Expect(2) = 3.7
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 775 NXXKKPXPPPPPP 737
N P PPPPPP
Sbjct: 362 NMRPPPPPPPPPP 374
Score = 23.8 bits (49), Expect(2) = 3.7
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 760 PXPPPPPPXXXXK 722
P PPPPPP K
Sbjct: 400 PTPPPPPPLLAPK 412
>10_06_0039 -
9966744-9967535,9968241-9968482,9969021-9969223,
9969333-9970645
Length = 849
Score = 29.5 bits (63), Expect = 4.3
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 811 PXXPXGXGXXFFNXXKKPXPPPPPP 737
P P F N KP PPPPPP
Sbjct: 331 PPPPPPPPSRFNNTTPKPPPPPPPP 355
>07_03_1483 +
26881032-26882035,26882130-26882204,26882324-26882861,
26883999-26884895,26885178-26885327,26885459-26885791,
26886501-26886695,26887805-26887918
Length = 1101
Score = 29.5 bits (63), Expect = 4.3
Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = -3
Query: 155 LWLT-SSKALGLGIIICHPGCN 93
LWL +S ++G G IICH GC+
Sbjct: 336 LWLVQNSNSIGQGYIICHLGCH 357
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.5 bits (63), Expect = 4.3
Identities = 25/91 (27%), Positives = 25/91 (27%)
Frame = -1
Query: 760 PXPPPPPPXXXXKXKXKXXXXXXXXXFXXXXXXGXPXXXXXGXPXFXPXKKXXFXPPXXX 581
P PPPPPP P G P P K PP
Sbjct: 311 PAPPPPPPPKPAAAAPPPPPPPKA---------APPPPPPKGPPPPPPAKGPP--PPPPP 359
Query: 580 XGXVPXPXXXFXXIXGXPXXPPPKXXNPXPP 488
G P P G P PPPK PP
Sbjct: 360 KGPSPPPPPPPGGKKGGPPPPPPKGGASRPP 390
Score = 29.5 bits (63), Expect = 4.3
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -2
Query: 828 PKXQXPXXPPXGXXGFFLXPXKNPXHPPPPXXXGKK 721
P + P PP P K P PPPP GKK
Sbjct: 339 PPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKK 374
Score = 23.8 bits (49), Expect(2) = 8.0
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1
Query: 766 KKPXPPPPPP 737
KK PPPPPP
Sbjct: 373 KKGGPPPPPP 382
Score = 23.0 bits (47), Expect(2) = 8.0
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 829 PKKXKXPXXPXGXGXXFFNXXKKPXPPPPP 740
PK P P G K P PPPPP
Sbjct: 332 PKAAPPPPPPKGPPPP--PPAKGPPPPPPP 359
>05_07_0031 - 27183252-27183317,27183542-27184282
Length = 268
Score = 23.8 bits (49), Expect(2) = 5.3
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 763 KPXPPPPPP 737
+P PPPPPP
Sbjct: 114 QPSPPPPPP 122
Score = 23.8 bits (49), Expect(2) = 5.3
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 760 PXPPPPPPXXXXK 722
P PPPPPP K
Sbjct: 121 PPPPPPPPTTTTK 133
>06_03_0082 + 16363742-16364632
Length = 296
Score = 28.7 bits (61), Expect = 7.5
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1
Query: 796 GXGXXFFNXXKKPXPPPPPP 737
G G F ++P PPPPPP
Sbjct: 157 GGGDQFGGGEERPPPPPPPP 176
>05_05_0233 + 23496405-23496932,23497346-23497621,23497747-23497938
Length = 331
Score = 28.7 bits (61), Expect = 7.5
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 447 FFFXXXXXFFXXXFFFXFFFXR 382
FFF FF FFF FFF R
Sbjct: 67 FFFFFFFFFFFFFFFFFFFFDR 88
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 25.0 bits (52), Expect(2) = 7.8
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1
Query: 766 KKPXPPPPPP 737
K P PPPPPP
Sbjct: 760 KAPAPPPPPP 769
Score = 21.8 bits (44), Expect(2) = 7.8
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -1
Query: 775 NXXKKPXPPPPP 740
N P PPPPP
Sbjct: 743 NKRNPPAPPPPP 754
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,276,976
Number of Sequences: 37544
Number of extensions: 351649
Number of successful extensions: 7349
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6281
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2870111300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -