Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_O16
         (985 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    26   1.5  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    25   2.6  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   6.1  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    24   8.0  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 26.2 bits (55), Expect = 1.5
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = +3

Query: 738 GGGGGGXGFXLXLKKXXPXPXGXXGXFXFLGPXXP 842
           GGGGGG G    + +  P   G  G   +  P  P
Sbjct: 125 GGGGGGYGHQGSMMRAMPPELGMYGGGCYGSPPVP 159



 Score = 23.8 bits (49), Expect = 8.0
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1

Query: 781 FFNXXKKPXPPPPPP 737
           F +    P PPPPPP
Sbjct: 776 FADGIGSPPPPPPPP 790


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 25.4 bits (53), Expect = 2.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 140 KRSTTTAWQSRWWCDARQQERS 205
           +++T   WQ  W  DA QQ+ S
Sbjct: 930 RQNTIDCWQEEWDADALQQDAS 951


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 6.1
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -1

Query: 775 NXXKKPXPPPPPP 737
           N    P PPPPPP
Sbjct: 578 NAQPPPAPPPPPP 590


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.8 bits (49), Expect = 8.0
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -3

Query: 152 WLTSSKALGLGIIICHPGC 96
           WL  +    +G ++C PGC
Sbjct: 445 WLQKATEHVIGCVLCSPGC 463


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 570,771
Number of Sequences: 2352
Number of extensions: 10017
Number of successful extensions: 141
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 136
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 107707938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)