Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_O16
(985 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 25 0.79
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 25 1.4
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 24 1.8
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 24 2.4
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 23 3.2
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 3.2
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.2
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.2
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.2
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.2
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.2
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.2
DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 vari... 23 4.2
DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 vari... 23 4.2
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 22 9.8
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 9.8
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 25.4 bits (53), Expect = 0.79
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1
Query: 763 KPXPPPPPP 737
KP PPPPPP
Sbjct: 340 KPAPPPPPP 348
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.4
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +3
Query: 195 RNDRRAYEFQQRQALRDDWNQV 260
RN++R E +R+ + DW QV
Sbjct: 403 RNEKRLAEQDRRERMEFDWKQV 424
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 24.2 bits (50), Expect = 1.8
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -1
Query: 766 KKPXPPPPPP 737
++P PPPPPP
Sbjct: 1353 QQPPPPPPPP 1362
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 23.8 bits (49), Expect = 2.4
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = -3
Query: 188 LRHTTSGIATRLWLTSSKALGLGIIICHPGCNCKLV-CLYTTLKTDXNLYRISH 30
L T G+ + + +KAL + P C CK V CL D +Y ISH
Sbjct: 285 LSWTPYGVMSMIGAFGNKALLTPGVTMIPACTCKAVACL------DPYVYAISH 332
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 23.4 bits (48), Expect = 3.2
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -1
Query: 307 LWVGPRGFCSLCSKSRTWFQSSRRACL 227
LWV P + S C+ T+F ++ C+
Sbjct: 140 LWVPPAIYQSSCTIDVTYFPFDQQTCI 166
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.4 bits (48), Expect = 3.2
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 760 PXPPPPPP 737
P PPPPPP
Sbjct: 1857 PEPPPPPP 1864
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.0 bits (47), Expect = 4.2
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -2
Query: 156 VVVDLFQSLGPGYYYLPSWLQL 91
V+V +F P Y +PSW+++
Sbjct: 276 VLVLIFHHRTPDRYVMPSWIKM 297
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.0 bits (47), Expect = 4.2
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -2
Query: 156 VVVDLFQSLGPGYYYLPSWLQL 91
V+V +F P Y +PSW+++
Sbjct: 276 VLVLIFHHRTPDRYVMPSWIKM 297
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.0 bits (47), Expect = 4.2
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -2
Query: 156 VVVDLFQSLGPGYYYLPSWLQL 91
V+V +F P Y +PSW+++
Sbjct: 276 VLVLIFHHRTPDRYVMPSWIKM 297
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.0 bits (47), Expect = 4.2
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -2
Query: 156 VVVDLFQSLGPGYYYLPSWLQL 91
V+V +F P Y +PSW+++
Sbjct: 276 VLVLIFHHRTPDRYVMPSWIKM 297
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.0 bits (47), Expect = 4.2
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -2
Query: 156 VVVDLFQSLGPGYYYLPSWLQL 91
V+V +F P Y +PSW+++
Sbjct: 276 VLVLIFHHRTPDRYVMPSWIKM 297
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 23.0 bits (47), Expect = 4.2
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -2
Query: 156 VVVDLFQSLGPGYYYLPSWLQL 91
V+V +F P Y +PSW+++
Sbjct: 276 VLVLIFHHRTPDRYVMPSWIKM 297
>DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 variant
2 precursor protein.
Length = 94
Score = 23.0 bits (47), Expect = 4.2
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 125 LGIIICHPGCNCKL 84
L I IC PGC C+L
Sbjct: 62 LCIKICAPGCVCRL 75
>DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 variant
1 precursor protein.
Length = 92
Score = 23.0 bits (47), Expect = 4.2
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 125 LGIIICHPGCNCKL 84
L I IC PGC C+L
Sbjct: 62 LCIKICAPGCVCRL 75
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 21.8 bits (44), Expect = 9.8
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 184 RKAAGTIAVPTSSSRDKLSVTTGTKFVT 267
RK I S + + VTTGTK V+
Sbjct: 276 RKVLAGIVQTKGSDAELICVTTGTKCVS 303
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.8 bits (44), Expect = 9.8
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -1
Query: 307 LWVGPRGFCSLCSKSRTWFQSSRRAC 230
L+V P F S C TWF + C
Sbjct: 137 LYVPPGIFKSTCKIDITWFPFDDQRC 162
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,585
Number of Sequences: 438
Number of extensions: 3995
Number of successful extensions: 29
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 32532591
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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