Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_O14
         (876 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.       25   3.0  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    25   4.0  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    24   7.0  

>DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.
          Length = 508

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 400 PGVGLFMQNAFIFAGSLVFKFGRTE 474
           P   LF+ NA  F G+ + KF +TE
Sbjct: 275 PQTKLFLMNALYFNGTWLNKFPKTE 299


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +1

Query: 58  SESGEKRNIMASILAGL-LFFAGWWFIIDAASVYPGDLPNAAHVCGVMATLSMIMVNSVS 234
           S+SGEK ++  SIL  L +FF     II   S+    L        ++ TLS+++  +V 
Sbjct: 265 SDSGEKISLCISILLSLTVFFLLLAEIIPPTSLTVPLLGKYLLFTMMLVTLSVVVTIAVL 324

Query: 235 NAQVR 249
           N   R
Sbjct: 325 NVNFR 329


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 19/56 (33%), Positives = 28/56 (50%)
 Frame = +1

Query: 58  SESGEKRNIMASILAGLLFFAGWWFIIDAASVYPGDLPNAAHVCGVMATLSMIMVN 225
           S+SGEK  +  SIL  L  F    F++ A  + P  L  A  + G     +MI+V+
Sbjct: 271 SDSGEKVTLCISILVSLTVF----FLLLAEIIPPTSL--AVPLLGKYLLFTMILVS 320


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 711,814
Number of Sequences: 2352
Number of extensions: 14268
Number of successful extensions: 31
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93853377
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)