Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_O14
         (876 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024865-1|AAF60878.1|  157|Caenorhabditis elegans Hypothetical ...   155   4e-38
Z95310-2|CAB08563.1|  394|Caenorhabditis elegans Hypothetical pr...    32   0.62 
Z83104-6|CAB05479.1|  394|Caenorhabditis elegans Hypothetical pr...    32   0.62 
Z73898-7|CAA98070.1|  577|Caenorhabditis elegans Hypothetical pr...    29   4.4  
AL132898-6|CAC14409.1|  187|Caenorhabditis elegans Hypothetical ...    29   5.8  
AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical ...    29   5.8  

>AC024865-1|AAF60878.1|  157|Caenorhabditis elegans Hypothetical
           protein Y74C10AL.2 protein.
          Length = 157

 Score =  155 bits (376), Expect = 4e-38
 Identities = 70/138 (50%), Positives = 96/138 (69%), Gaps = 1/138 (0%)
 Frame = +1

Query: 73  KRNIMASILAGLLFFAGWWFIIDAASVYPGD-LPNAAHVCGVMATLSMIMVNSVSNAQVR 249
           +RN +AS+++  LFF GWW +ID A+V   +   N   +  V +T++M MVN++SN+QVR
Sbjct: 19  RRNAVASVVSAALFFIGWWLMIDTAAVTNKENWTNVYFIITVASTVAMFMVNAISNSQVR 78

Query: 250 GETYTGGCMGPRGARLWLFLGFVVGFASLIAACWILFANYVNASSSKHAWPGVGLFMQNA 429
           GE+   G +G +G+RLWL   FVV FASL+AA WILF++YV    S   WPGV LF+ N 
Sbjct: 79  GESLHEGLLGTKGSRLWLMAAFVVSFASLVAATWILFSDYVLIQGSHSVWPGVALFLTNF 138

Query: 430 FIFAGSLVFKFGRTEDLW 483
            IFA S V+KFGRTE++W
Sbjct: 139 IIFASSCVYKFGRTEEMW 156


>Z95310-2|CAB08563.1|  394|Caenorhabditis elegans Hypothetical
           protein F09B12.5 protein.
          Length = 394

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
 Frame = -2

Query: 407 TPGQACLEELALT*FAKSIQQA---AMRDAKPTTNPRKSQSLAPRGPMQPPVYVSPRT 243
           T  +A LE + LT   KS  Q+       AKPT  P  S++  P  P   P YV P T
Sbjct: 240 TTERAHLENILLTIPLKSTTQSPALTSSSAKPTKPPTTSETSKPTFPSTLPAYVLPMT 297


>Z83104-6|CAB05479.1|  394|Caenorhabditis elegans Hypothetical
           protein F09B12.5 protein.
          Length = 394

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
 Frame = -2

Query: 407 TPGQACLEELALT*FAKSIQQA---AMRDAKPTTNPRKSQSLAPRGPMQPPVYVSPRT 243
           T  +A LE + LT   KS  Q+       AKPT  P  S++  P  P   P YV P T
Sbjct: 240 TTERAHLENILLTIPLKSTTQSPALTSSSAKPTKPPTTSETSKPTFPSTLPAYVLPMT 297


>Z73898-7|CAA98070.1|  577|Caenorhabditis elegans Hypothetical
           protein ZK822.5a protein.
          Length = 577

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +1

Query: 274 MGPRGARLWLFLGFVVGFASLIAACWI 354
           M  RGA++WL   FV+G AS I  C++
Sbjct: 81  MFQRGAQIWL--NFVIGVASSIVTCFV 105


>AL132898-6|CAC14409.1|  187|Caenorhabditis elegans Hypothetical
           protein Y59A8B.9 protein.
          Length = 187

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = -2

Query: 356 SIQQAAMRDAKPTTNPRKSQS-LAPRGPMQPPVYVSPRTCA 237
           +++  A   A P T P  S+S  APR     P    P+TCA
Sbjct: 39  TMRTPAATPAAPPTRPTPSRSSAAPRATAPTPTAAPPKTCA 79


>AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical
           protein Y59A8B.7 protein.
          Length = 316

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = -2

Query: 356 SIQQAAMRDAKPTTNPRKSQS-LAPRGPMQPPVYVSPRTCA 237
           +++  A   A P T P  S+S  APR     P    P+TCA
Sbjct: 168 TMRTPAATPAAPPTRPTPSRSSAAPRATAPTPTAAPPKTCA 208


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,450,396
Number of Sequences: 27780
Number of extensions: 313154
Number of successful extensions: 878
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 876
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)