Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_O12
         (1138 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC121794-1|AAI21795.1|  806|Homo sapiens valosin-containing prot...   111   6e-24
BC110913-1|AAI10914.1|  806|Homo sapiens valosin-containing prot...   111   6e-24
AL353795-2|CAH70993.1|  806|Homo sapiens valosin-containing prot...   111   6e-24
AF100752-1|AAD43016.1|  806|Homo sapiens transitional endoplasmi...   111   6e-24
AC004472-1|AAC07984.1|  806|Homo sapiens TERA_HUMAN protein.          111   6e-24
AF313485-1|AAG29873.1|  307|Homo sapiens valosin-containing prot...    32   3.4  

>BC121794-1|AAI21795.1|  806|Homo sapiens valosin-containing protein
           protein.
          Length = 806

 Score =  111 bits (266), Expect = 6e-24
 Identities = 53/70 (75%), Positives = 66/70 (94%)
 Frame = +2

Query: 152 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 331
           AD+K  DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5   ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63

Query: 332 RKETVCIVLS 361
           R+E VCIVLS
Sbjct: 64  RREAVCIVLS 73



 Score = 32.3 bits (70), Expect = 3.4
 Identities = 14/20 (70%), Positives = 14/20 (70%)
 Frame = +3

Query: 363 DDNCPDEXIRMKRVVXNXLR 422
           DD C DE IRM RVV N LR
Sbjct: 74  DDTCSDEKIRMNRVVRNNLR 93


>BC110913-1|AAI10914.1|  806|Homo sapiens valosin-containing protein
           protein.
          Length = 806

 Score =  111 bits (266), Expect = 6e-24
 Identities = 53/70 (75%), Positives = 66/70 (94%)
 Frame = +2

Query: 152 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 331
           AD+K  DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5   ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63

Query: 332 RKETVCIVLS 361
           R+E VCIVLS
Sbjct: 64  RREAVCIVLS 73



 Score = 32.3 bits (70), Expect = 3.4
 Identities = 14/20 (70%), Positives = 14/20 (70%)
 Frame = +3

Query: 363 DDNCPDEXIRMKRVVXNXLR 422
           DD C DE IRM RVV N LR
Sbjct: 74  DDTCSDEKIRMNRVVRNNLR 93


>AL353795-2|CAH70993.1|  806|Homo sapiens valosin-containing protein
           protein.
          Length = 806

 Score =  111 bits (266), Expect = 6e-24
 Identities = 53/70 (75%), Positives = 66/70 (94%)
 Frame = +2

Query: 152 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 331
           AD+K  DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5   ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63

Query: 332 RKETVCIVLS 361
           R+E VCIVLS
Sbjct: 64  RREAVCIVLS 73



 Score = 32.3 bits (70), Expect = 3.4
 Identities = 14/20 (70%), Positives = 14/20 (70%)
 Frame = +3

Query: 363 DDNCPDEXIRMKRVVXNXLR 422
           DD C DE IRM RVV N LR
Sbjct: 74  DDTCSDEKIRMNRVVRNNLR 93


>AF100752-1|AAD43016.1|  806|Homo sapiens transitional endoplasmic
           reticulum ATPase protein.
          Length = 806

 Score =  111 bits (266), Expect = 6e-24
 Identities = 53/70 (75%), Positives = 66/70 (94%)
 Frame = +2

Query: 152 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 331
           AD+K  DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5   ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63

Query: 332 RKETVCIVLS 361
           R+E VCIVLS
Sbjct: 64  RREAVCIVLS 73



 Score = 32.3 bits (70), Expect = 3.4
 Identities = 14/20 (70%), Positives = 14/20 (70%)
 Frame = +3

Query: 363 DDNCPDEXIRMKRVVXNXLR 422
           DD C DE IRM RVV N LR
Sbjct: 74  DDTCSDEKIRMNRVVRNNLR 93


>AC004472-1|AAC07984.1|  806|Homo sapiens TERA_HUMAN protein.
          Length = 806

 Score =  111 bits (266), Expect = 6e-24
 Identities = 53/70 (75%), Positives = 66/70 (94%)
 Frame = +2

Query: 152 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 331
           AD+K  DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5   ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63

Query: 332 RKETVCIVLS 361
           R+E VCIVLS
Sbjct: 64  RREAVCIVLS 73



 Score = 32.3 bits (70), Expect = 3.4
 Identities = 14/20 (70%), Positives = 14/20 (70%)
 Frame = +3

Query: 363 DDNCPDEXIRMKRVVXNXLR 422
           DD C DE IRM RVV N LR
Sbjct: 74  DDTCSDEKIRMNRVVRNNLR 93


>AF313485-1|AAG29873.1|  307|Homo sapiens valosin-containing protein
           protein.
          Length = 307

 Score = 32.3 bits (70), Expect = 3.4
 Identities = 14/20 (70%), Positives = 14/20 (70%)
 Frame = +3

Query: 363 DDNCPDEXIRMKRVVXNXLR 422
           DD C DE IRM RVV N LR
Sbjct: 12  DDTCSDEKIRMNRVVRNNLR 31


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,089,281
Number of Sequences: 237096
Number of extensions: 1426843
Number of successful extensions: 5927
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5927
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 15866314562
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)