Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_O06
(1192 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 35 0.11
04_01_0069 - 697811-697876,697956-698166,698265-698359,698448-69... 33 0.44
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 33 0.58
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 32 0.77
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 31 1.8
01_06_0226 - 27684093-27685091 31 1.8
03_01_0515 - 3864796-3865425 31 2.4
06_01_0486 - 3455030-3455770 30 3.1
12_02_1174 - 26696869-26698191 29 5.4
12_02_0299 - 17051570-17052474,17053542-17053755 29 5.4
11_06_0610 - 25449085-25453284 29 5.4
08_01_0388 + 3432177-3433154 29 9.5
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 9.5
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 29 9.5
01_05_0490 + 22672241-22674679 29 9.5
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 35.1 bits (77), Expect = 0.11
Identities = 18/66 (27%), Positives = 24/66 (36%)
Frame = +2
Query: 689 PXXPXHGPXPPXAXXXSXPAITPXPXLXSVXCXETXRHXPXXPAXAIPXXXPSXAXPXPX 868
P P P PP A + P+ P + R+ P P + + A P P
Sbjct: 709 PSAPPPPPPPPPANRSNGPSAPAPPLPPPLPAAANKRNPPAPPPPPLMTGKKAPAPPPPP 768
Query: 869 PXAPAP 886
P AP P
Sbjct: 769 PQAPKP 774
>04_01_0069 -
697811-697876,697956-698166,698265-698359,698448-698513,
698595-698643,698720-698770,698856-698908,699263-699331,
699874-699928,700011-700099,700217-700302,700376-700432,
700575-700716,701637-702032
Length = 494
Score = 33.1 bits (72), Expect = 0.44
Identities = 20/69 (28%), Positives = 23/69 (33%), Gaps = 1/69 (1%)
Frame = +2
Query: 680 LXQPXXPXHGPXPPXAXXXSXPAITPXPXLXSVXCXETXRHXPXXPAXA-IPXXXPSXAX 856
L P P H P PP A A +P P + R P A P P+
Sbjct: 32 LPPPPAPHHAPPPPGAHVHYFRAASPIPIFRAAASSRPPRPPPPSTTTAPPPPAAPAVTP 91
Query: 857 PXPXPXAPA 883
P P PA
Sbjct: 92 ARPPPQQPA 100
>09_06_0277 - 21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 32.7 bits (71), Expect = 0.58
Identities = 31/136 (22%), Positives = 42/136 (30%), Gaps = 1/136 (0%)
Frame = +2
Query: 668 PXQXLXQPXXPXHGPXPPXAXXX-SXPAITPXPXLXSVXCXETXRHXPXXPAXAIPXXXP 844
P + P P P PP S P I P P + + P P P
Sbjct: 475 PPEITPYPSPPEVVPGPPEINPYPSPPEIVPSPP--EITPYPSPPEIVPSPPEITPYPSP 532
Query: 845 SXAXPXPXPXAPAPXICXXWXPXXXTHXXXIXTSXRXTXWXRXXPDXSXLPPEXFGWXTC 1024
P P AP+P I P + S P+ + PPE +
Sbjct: 533 PEIVPSPPEIAPSPPIVTPMPPIIYPSPPEVTPSPPEITPYPSPPEVTPGPPEITPY--- 589
Query: 1025 XSXERLSLSPPAXXPH 1072
S ++ SPP P+
Sbjct: 590 PSPPEITPSPPEITPY 605
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 32.3 bits (70), Expect = 0.77
Identities = 20/77 (25%), Positives = 23/77 (29%)
Frame = +2
Query: 656 RWSXPXQXLXQPXXPXHGPXPPXAXXXSXPAITPXPXLXSVXCXETXRHXPXXPAXAIPX 835
R S P Q Q P PP + TP P + P P +P
Sbjct: 39 RSSSPTQTTLQQLHSPDSPPPPPLPTPTVTTPTPPPPPPAPRPPRRHHRIPPPPPPLLPT 98
Query: 836 XXPSXAXPXPXPXAPAP 886
P A P P P P
Sbjct: 99 PPPPPASISPTPAPPLP 115
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 31.1 bits (67), Expect = 1.8
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +3
Query: 825 PSXXPSPPXPTPXXXPPXPRRTSAXLGXPXXXHTPXQSXPP 947
PS PP P P PP P + G P P PP
Sbjct: 221 PSAASLPPLPPPPPPPPKPANIAGAPGLPLPPPPPPPPGPP 261
>01_06_0226 - 27684093-27685091
Length = 332
Score = 31.1 bits (67), Expect = 1.8
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +3
Query: 789 RXXXIXRXRRXXPSXXPSPPXPTPXXXPPXPRRTSA 896
R + R R PS PSPP PTP P P A
Sbjct: 130 RGLPMMRRRLESPSRSPSPPSPTPAVALPLPNYRQA 165
>03_01_0515 - 3864796-3865425
Length = 209
Score = 30.7 bits (66), Expect = 2.4
Identities = 22/77 (28%), Positives = 25/77 (32%)
Frame = +2
Query: 680 LXQPXXPXHGPXPPXAXXXSXPAITPXPXLXSVXCXETXRHXPXXPAXAIPXXXPSXAXP 859
L P P PP A P P P + S P PA + P PS P
Sbjct: 51 LAPPPSVTSSPPPPAAGPLMPPP-PPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPP 109
Query: 860 XPXPXAPAPXICXXWXP 910
P +P P W P
Sbjct: 110 SPVKSSPPPP--PAWSP 124
>06_01_0486 - 3455030-3455770
Length = 246
Score = 30.3 bits (65), Expect = 3.1
Identities = 18/66 (27%), Positives = 22/66 (33%)
Frame = +2
Query: 689 PXXPXHGPXPPXAXXXSXPAITPXPXLXSVXCXETXRHXPXXPAXAIPXXXPSXAXPXPX 868
P P + P PP P TP P + T + P + P P P P
Sbjct: 87 PPTPPYVPSPPPYVPPYIPPPTP-PYVPPYIPPPTPPYVPPPTPPSPPPYVPPPTPPSPP 145
Query: 869 PXAPAP 886
P P P
Sbjct: 146 PYVPPP 151
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/48 (31%), Positives = 17/48 (35%)
Frame = +2
Query: 743 PAITPXPXLXSVXCXETXRHXPXXPAXAIPXXXPSXAXPXPXPXAPAP 886
PA++P P T P P P PS P P P P P
Sbjct: 117 PALSPVPPPPPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPPPPPP 164
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 29.5 bits (63), Expect = 5.4
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 825 PSXXPSPPXPTPXXXPPXP 881
PS PSPP P P PP P
Sbjct: 314 PSFYPSPPPPPPPPPPPPP 332
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +3
Query: 825 PSXXPSPPXPTPXXXPPXPRRTSAXLGXPXXXHTPXQSXPPXA 953
P SPP P P PP P ++ P +S PP A
Sbjct: 1146 PPPEKSPPPPAPVILPPPPIKSPPPPAPVISPPPPVKSPPPPA 1188
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +3
Query: 825 PSXXPSPPXPTPXXXPPXPRRTSAXLGXPXXXHTPXQSXPPXA 953
P SPP P P PP P ++ P +S PP A
Sbjct: 1162 PPPIKSPPPPAPVISPPPPVKSPPPPAPVILPPPPVKSPPPPA 1204
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +3
Query: 825 PSXXPSPPXPTPXXXPPXPRRTSAXLGXPXXXHTPXQSXPPXA 953
P SPP P P PP P ++ P +S PP A
Sbjct: 1178 PPPVKSPPPPAPVILPPPPVKSPPPPAPVISPPPPVKSPPPPA 1220
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +3
Query: 825 PSXXPSPPXPTPXXXPPXPRRTSAXLGXPXXXHTPXQSXPPXA 953
P SPP P P PP P ++ P +S PP A
Sbjct: 1194 PPPVKSPPPPAPVISPPPPVKSPPPPAPVILPPPPVKSPPPPA 1236
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +3
Query: 825 PSXXPSPPXPTPXXXPPXPRRTSAXLGXPXXXHTPXQSXPPXA 953
P SPP P P PP P ++ P +S PP A
Sbjct: 1210 PPPVKSPPPPAPVILPPPPVKSPPPPAPVISPPPPEKSPPPAA 1252
>08_01_0388 + 3432177-3433154
Length = 325
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = +3
Query: 807 RXRRXXPSXXPSPPXPTP--XXXPPXPRRTSA 896
R RR S P+PP P P PP PR +A
Sbjct: 120 RGRRQSSSSNPTPPPPKPSDPIAPPPPRHAAA 151
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 28.7 bits (61), Expect = 9.5
Identities = 22/74 (29%), Positives = 24/74 (32%)
Frame = +2
Query: 662 SXPXQXLXQPXXPXHGPXPPXAXXXSXPAITPXPXLXSVXCXETXRHXPXXPAXAIPXXX 841
S P Q P P P PP S P P P L S P PA
Sbjct: 1153 SPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPPLPS--------GPPPQPAPPPLPIQ 1204
Query: 842 PSXAXPXPXPXAPA 883
P P P P +P+
Sbjct: 1205 PPPIPPPPVPSSPS 1218
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +3
Query: 813 RRXXPSXXPSPPXPTPXXXPPXPRRTSAXLGXPXXXHTPXQSXP 944
R PS P PP P P PP P P P S P
Sbjct: 341 RPVQPSNAPPPPPPPPPPPPPPPPPKLNTAPKPPPPPPPPPSVP 384
>01_05_0490 + 22672241-22674679
Length = 812
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Frame = +3
Query: 825 PSXXPSPPXPTPXXXPP-XPRRTSAXLGXPXXXHTPXQSXPP 947
PS PP P P PP PRR P +P PP
Sbjct: 659 PSRPAPPPPPPPQQQPPFYPRRAVVYYTYPLPPPSPPLPPPP 700
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,810,237
Number of Sequences: 37544
Number of extensions: 257781
Number of successful extensions: 1892
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1578
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3631571424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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