Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_O02
         (1027 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ970243-1|CAI96715.1|  129|Anopheles gambiae putative reverse t...    25   4.8  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           24   8.4  

>AJ970243-1|CAI96715.1|  129|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 129

 Score = 24.6 bits (51), Expect = 4.8
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +1

Query: 226 IYLHFMQNPTMHHCKTYI 279
           +Y   +QN  M+HC++YI
Sbjct: 14  VYEIVIQNSLMYHCRSYI 31


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.8 bits (49), Expect = 8.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 161 PYHPRSNMTCRVRWCIYKVR 102
           P  PR ++TCR   C++ +R
Sbjct: 3   PQRPRLSVTCRPTKCLHPLR 22


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 483,082
Number of Sequences: 2352
Number of extensions: 7857
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 113463324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)