Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_N24
         (860 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    24   6.8  
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    24   6.8  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    24   6.8  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   9.0  

>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 21/69 (30%), Positives = 34/69 (49%)
 Frame = +3

Query: 420 NKRYAYIEHVTQKSDAAKKMPQSSRPEQRATFESFETLPNLPSPRYVKSHLPLSCLPPAL 599
           NK++ Y+E V Q  D+   +      EQ A FE    LPN PS   + +++  S   P +
Sbjct: 85  NKQFVYVEDVAQGVDSG--LLDLDVLEQ-ALFERL-MLPN-PSEYLIPNNITTSD-TPQI 138

Query: 600 LDTAKVFYI 626
            +T  + Y+
Sbjct: 139 AETKAILYL 147


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = -3

Query: 297 LSCIYLQRGLGNXGVARYPGAPTRTNGRLYPL*Y 196
           LSCI L  GLGN  V R+P       G  + + Y
Sbjct: 86  LSCIALSVGLGN--VWRFPFTALENGGGAFVIPY 117


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = -3

Query: 297 LSCIYLQRGLGNXGVARYPGAPTRTNGRLYPL*Y 196
           LSCI L  GLGN  V R+P       G  + + Y
Sbjct: 86  LSCIALSVGLGN--VWRFPFTALENGGGAFVIPY 117


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +3

Query: 300 IRPDDIWVIPFSRS 341
           +RPD   VIPFSRS
Sbjct: 247 VRPDTWSVIPFSRS 260


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 781,266
Number of Sequences: 2352
Number of extensions: 16672
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91786122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)