Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_N24
(860 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28741-2|AAA68326.2| 377|Caenorhabditis elegans Hypothetical pr... 31 1.1
U28741-3|AAA68327.2| 410|Caenorhabditis elegans Hypothetical pr... 29 3.2
AF038606-8|AAB92022.2| 313|Caenorhabditis elegans Serpentine re... 29 3.2
U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-l... 29 4.3
U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-l... 29 4.3
AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interacto... 29 4.3
AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic helix-l... 29 4.3
Z81054-3|CAC70083.1| 190|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z81054-2|CAB02880.3| 223|Caenorhabditis elegans Hypothetical pr... 29 5.6
U41263-10|AAO38593.1| 610|Caenorhabditis elegans Hypothetical p... 28 7.4
AL132858-6|CAB60475.1| 412|Caenorhabditis elegans Hypothetical ... 28 7.4
>U28741-2|AAA68326.2| 377|Caenorhabditis elegans Hypothetical
protein F35D2.2 protein.
Length = 377
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +3
Query: 426 RYAYIEHVTQKSDAAKK--MPQSSRPEQRATFESFETLPNLPSPRYVKSHLPLSCLPP 593
++ Y+ H D K+ + S P +A + P LP ++ K+++PL+C PP
Sbjct: 144 KFGYVNHPVNMMDLEKEDFVTLMSDPAVQANRNAH---PTLPLGKFAKTYVPLNCKPP 198
>U28741-3|AAA68327.2| 410|Caenorhabditis elegans Hypothetical
protein F35D2.1 protein.
Length = 410
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +3
Query: 408 SQPLNKRYAYIEHVTQKSDAAKK--MPQSSRPEQRATFESFETLPNLPSPRYVKSHLPLS 581
+Q ++ Y+ H D K+ + S P +A + P LP ++ K +P+S
Sbjct: 135 TQDTTTKFGYLNHPVNMLDLEKEDFVKLMSDPAVQANRRAH---PTLPMGQFGKQFMPMS 191
Query: 582 CLPP 593
C PP
Sbjct: 192 CKPP 195
>AF038606-8|AAB92022.2| 313|Caenorhabditis elegans Serpentine
receptor, class z protein60 protein.
Length = 313
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 65 NTKVTSFNFGVGLNIII*QKKNMALRFPHEIK 160
NT +TSFN L ++ QK N A+R H+I+
Sbjct: 282 NTLLTSFNLKTFLKVLFNQKTNSAVRPLHQIQ 313
>U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-like
protein 1, isoformb protein.
Length = 937
Score = 29.1 bits (62), Expect = 4.3
Identities = 25/98 (25%), Positives = 41/98 (41%)
Frame = +3
Query: 270 DHAEDIYNLEIRPDDIWVIPFSRSGTTWLQELVWLVNNNLDYAAAASQPLNKRYAYIEHV 449
D D+Y+ ++P + V+ S LQ W +D A A + LN++ ++
Sbjct: 828 DIIPDLYSGGVKPTNAVVLAKSADHIRRLQAEKWDKTQKIDEAKAKIEKLNQKITSLQ-- 885
Query: 450 TQKSDAAKKMPQSSRPEQRATFESFETLPNLPSPRYVK 563
+PQSS P + +S +L RYVK
Sbjct: 886 -------SNLPQSSAPSSSSQVDSKTSLETF-FDRYVK 915
>U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-like
protein 1, isoforma protein.
Length = 1009
Score = 29.1 bits (62), Expect = 4.3
Identities = 25/98 (25%), Positives = 41/98 (41%)
Frame = +3
Query: 270 DHAEDIYNLEIRPDDIWVIPFSRSGTTWLQELVWLVNNNLDYAAAASQPLNKRYAYIEHV 449
D D+Y+ ++P + V+ S LQ W +D A A + LN++ ++
Sbjct: 828 DIIPDLYSGGVKPTNAVVLAKSADHIRRLQAEKWDKTQKIDEAKAKIEKLNQKITSLQ-- 885
Query: 450 TQKSDAAKKMPQSSRPEQRATFESFETLPNLPSPRYVK 563
+PQSS P + +S +L RYVK
Sbjct: 886 -------SNLPQSSAPSSSSQVDSKTSLETF-FDRYVK 915
>AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interactor
protein.
Length = 1009
Score = 29.1 bits (62), Expect = 4.3
Identities = 25/98 (25%), Positives = 41/98 (41%)
Frame = +3
Query: 270 DHAEDIYNLEIRPDDIWVIPFSRSGTTWLQELVWLVNNNLDYAAAASQPLNKRYAYIEHV 449
D D+Y+ ++P + V+ S LQ W +D A A + LN++ ++
Sbjct: 828 DIIPDLYSGGVKPTNAVVLAKSADHIRRLQAEKWDKTQKIDEAKAKIEKLNQKITSLQ-- 885
Query: 450 TQKSDAAKKMPQSSRPEQRATFESFETLPNLPSPRYVK 563
+PQSS P + +S +L RYVK
Sbjct: 886 -------SNLPQSSAPSSSSQVDSKTSLETF-FDRYVK 915
>AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic
helix-loop-helix leucinezipper WBSCR14-like protein
protein.
Length = 913
Score = 29.1 bits (62), Expect = 4.3
Identities = 25/98 (25%), Positives = 41/98 (41%)
Frame = +3
Query: 270 DHAEDIYNLEIRPDDIWVIPFSRSGTTWLQELVWLVNNNLDYAAAASQPLNKRYAYIEHV 449
D D+Y+ ++P + V+ S LQ W +D A A + LN++ ++
Sbjct: 732 DIIPDLYSGGVKPTNAVVLAKSADHIRRLQAEKWDKTQKIDEAKAKIEKLNQKITSLQ-- 789
Query: 450 TQKSDAAKKMPQSSRPEQRATFESFETLPNLPSPRYVK 563
+PQSS P + +S +L RYVK
Sbjct: 790 -------SNLPQSSAPSSSSQVDSKTSLETF-FDRYVK 819
>Z81054-3|CAC70083.1| 190|Caenorhabditis elegans Hypothetical
protein F01D4.5b protein.
Length = 190
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 490 ADLNRELRLRASKLCQIYRHRDMLKVTYRCRVCHQ 594
A +NR L +KL Q D ++ +Y C +CH+
Sbjct: 41 ATVNRTLDFHMTKLFQWEEQSDAIESSYVCALCHE 75
>Z81054-2|CAB02880.3| 223|Caenorhabditis elegans Hypothetical
protein F01D4.5a protein.
Length = 223
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 490 ADLNRELRLRASKLCQIYRHRDMLKVTYRCRVCHQ 594
A +NR L +KL Q D ++ +Y C +CH+
Sbjct: 82 ATVNRTLDFHMTKLFQWEEQSDAIESSYVCALCHE 116
>U41263-10|AAO38593.1| 610|Caenorhabditis elegans Hypothetical
protein T19D12.2a protein.
Length = 610
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 276 AEDIYNLEIRPDDIWVIPFSRSGTTWLQELVWLVNN 383
A+ + +L+ D +++ FS T LVWL+NN
Sbjct: 491 AKSLIDLQSNVDTLYINAFSMRDATISDGLVWLINN 526
>AL132858-6|CAB60475.1| 412|Caenorhabditis elegans Hypothetical
protein Y113G7A.11 protein.
Length = 412
Score = 28.3 bits (60), Expect = 7.4
Identities = 22/100 (22%), Positives = 36/100 (36%), Gaps = 1/100 (1%)
Frame = +3
Query: 291 NLEIRPDDIWVIPFSRSGTTWLQELVWLVNNNLDYAAAASQPLNKRYAYIEHVTQKSDAA 470
+++ D+ + + + GTTWLQ + + DY A L + IE + A
Sbjct: 81 SMQFGETDVVIATYPKCGTTWLQHITSQLIKGHDYKAGKGNELCVQSPMIERM-----GA 135
Query: 471 KKMPQSSRPEQRATFESFETLPNLPSPRYVKS-HLPLSCL 587
P T +P P +Y+ P CL
Sbjct: 136 AFADNIKGPRVLKTHFHHYNIPKYPDTKYIYCVRNPKDCL 175
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,438,991
Number of Sequences: 27780
Number of extensions: 361593
Number of successful extensions: 966
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 966
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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