Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_N22
         (1035 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            31   0.043
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    27   0.92 
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    24   8.5  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 31.5 bits (68), Expect = 0.043
 Identities = 24/83 (28%), Positives = 27/83 (32%)
 Frame = +1

Query: 709 GQXPXPXTXFPWXXFSPXDLPTSXPPXSXXXXPXXMXPXARLFRXXXFPAXPDXAXPXAX 888
           G  P P          P  LP   PP +    P      A+L     FP  P+   P A 
Sbjct: 529 GPPPPPPPGGAVLNIPPQFLP---PPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAP 585

Query: 889 XTXXPPXPPAXRXAPXPXXSPAG 957
               P  PP    A  P   PAG
Sbjct: 586 PPPPPMGPPPSPLAGGPLGGPAG 608



 Score = 29.5 bits (63), Expect = 0.17
 Identities = 23/88 (26%), Positives = 25/88 (28%), Gaps = 7/88 (7%)
 Frame = +1

Query: 757 PXDLPTSXPPXSXXXX--PXXMXPXARLFRXXXFPAXP-----DXAXPXAXXTXXPPXPP 915
           P   P   PP        P  + P   L R   FP  P         P       PP PP
Sbjct: 527 PLGPPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPP 586

Query: 916 AXRXAPXPXXSPAGXPTHAXSXQXPXLP 999
                  P    AG P    +   P LP
Sbjct: 587 PPPPMGPPPSPLAGGPLGGPAGSRPPLP 614



 Score = 25.0 bits (52), Expect = 3.7
 Identities = 11/33 (33%), Positives = 11/33 (33%)
 Frame = +2

Query: 782 PPXPXPXPPXKXXPXPXYSXPXXSRPXXIXPXP 880
           PP P P PP    P P    P         P P
Sbjct: 582 PPAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLP 614


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
            binding protein protein.
          Length = 838

 Score = 27.1 bits (57), Expect = 0.92
 Identities = 22/106 (20%), Positives = 30/106 (28%)
 Frame = +1

Query: 700  PTXGQXPXPXTXFPWXXFSPXDLPTSXPPXSXXXXPXXMXPXARLFRXXXFPAXPDXAXP 879
            PT  Q P P   +P     P  +    PP +       M P     +    P  P    P
Sbjct: 206  PTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRP--PMMGQP 263

Query: 880  XAXXTXXPPXPPAXRXAPXPXXSPAGXPTHAXSXQXPXLPPSXXXP 1017
                   P   P  + +P       G P+       P +P     P
Sbjct: 264  PPIRPPNPMGGPRPQISPQNSNLSGGMPSGMVGPPRPPMPMQGGAP 309


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 23.8 bits (49), Expect = 8.5
 Identities = 18/71 (25%), Positives = 20/71 (28%), Gaps = 1/71 (1%)
 Frame = +2

Query: 614 KATSXPFAXGXPXPFRXXCPPXGXIXPPHP-RXAXXPTQXXXFLGPXSXXXTFPLXXPPX 790
           K    PF  G P P     PP     PP P      P      +GP        +   P 
Sbjct: 61  KIAPNPFTAGPPKP-NISIPPPTMNMPPRPGMIPGMPGAPPLLMGPNGPLPPPMMGMRPP 119

Query: 791 PXPXPPXKXXP 823
           P   P     P
Sbjct: 120 PMMVPTMGMPP 130


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 717,777
Number of Sequences: 2352
Number of extensions: 11624
Number of successful extensions: 32
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 114696621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)