Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_N21
         (887 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL033403-5|CAI42107.1|  941|Homo sapiens MCF.2 cell line derived...    31   7.4  
AB085902-1|BAC41201.1|  941|Homo sapiens DBL proto-oncogene spli...    31   7.4  
AY358419-1|AAQ88785.1| 1137|Homo sapiens PLSS3001 protein.             30   9.8  
AL834531-1|CAD39187.1|  236|Homo sapiens hypothetical protein pr...    30   9.8  
AL355987-16|CAI12694.1| 1108|Homo sapiens MAM domain containing ...    30   9.8  
AL355987-15|CAM14253.1| 1153|Homo sapiens MAM domain containing ...    30   9.8  

>AL033403-5|CAI42107.1|  941|Homo sapiens MCF.2 cell line derived
           transforming sequence protein.
          Length = 941

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
 Frame = +2

Query: 518 KNVVTKATNHFTNQPNGHSDAISASDDAIPR-LKTPAISKESLKLAITDEEXEXRKXGPR 694
           +N+VT  T  F+++  G   +   +     +  KT   ++ +LK+ +  +  E R  GP 
Sbjct: 440 ENLVTSGTPFFSSKQVGVGYSFFQACKLFSKGKKTWRQNQSNLKIEVVPDCQEKRSSGPS 499

Query: 695 KTMSLSNPLEIVKN 736
            ++   N L+++KN
Sbjct: 500 SSLDNGNSLDVLKN 513


>AB085902-1|BAC41201.1|  941|Homo sapiens DBL proto-oncogene
           splicing variant 2 protein.
          Length = 941

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
 Frame = +2

Query: 518 KNVVTKATNHFTNQPNGHSDAISASDDAIPR-LKTPAISKESLKLAITDEEXEXRKXGPR 694
           +N+VT  T  F+++  G   +   +     +  KT   ++ +LK+ +  +  E R  GP 
Sbjct: 440 ENLVTSGTPFFSSKQVGVGYSFFQACKLFSKGKKTWRQNQSNLKIEVVPDCQEKRSSGPS 499

Query: 695 KTMSLSNPLEIVKN 736
            ++   N L+++KN
Sbjct: 500 SSLDNGNSLDVLKN 513


>AY358419-1|AAQ88785.1| 1137|Homo sapiens PLSS3001 protein.
          Length = 1137

 Score = 30.3 bits (65), Expect = 9.8
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +2

Query: 539 TNHFTNQPNGHSDAISASDDAIPRLKTPAI-SKESLKLA 652
           T+H T    GH   +  S DA+PR +T ++ SKE   LA
Sbjct: 767 TDHTTETAQGHYMVVDTSPDALPRGQTASLTSKEHRPLA 805


>AL834531-1|CAD39187.1|  236|Homo sapiens hypothetical protein
           protein.
          Length = 236

 Score = 30.3 bits (65), Expect = 9.8
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +2

Query: 539 TNHFTNQPNGHSDAISASDDAIPRLKTPAI-SKESLKLA 652
           T+H T    GH   +  S DA+PR +T ++ SKE   LA
Sbjct: 122 TDHTTETAQGHYMVVDTSPDALPRGQTASLTSKEHRPLA 160


>AL355987-16|CAI12694.1| 1108|Homo sapiens MAM domain containing 4
           protein.
          Length = 1108

 Score = 30.3 bits (65), Expect = 9.8
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +2

Query: 539 TNHFTNQPNGHSDAISASDDAIPRLKTPAI-SKESLKLA 652
           T+H T    GH   +  S DA+PR +T ++ SKE   LA
Sbjct: 738 TDHTTETAQGHYMVVDTSPDALPRGQTASLTSKEHRPLA 776


>AL355987-15|CAM14253.1| 1153|Homo sapiens MAM domain containing 4
           protein.
          Length = 1153

 Score = 30.3 bits (65), Expect = 9.8
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +2

Query: 539 TNHFTNQPNGHSDAISASDDAIPRLKTPAI-SKESLKLA 652
           T+H T    GH   +  S DA+PR +T ++ SKE   LA
Sbjct: 783 TDHTTETAQGHYMVVDTSPDALPRGQTASLTSKEHRPLA 821


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,405,694
Number of Sequences: 237096
Number of extensions: 1255399
Number of successful extensions: 2604
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2604
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)