Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_N19
         (982 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979     31   1.1  
12_02_0640 - 21447470-21448309                                         28   9.9  
12_02_0635 - 21430245-21431156                                         28   9.9  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    28   9.9  

>06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979
          Length = 304

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 14/51 (27%), Positives = 20/51 (39%)
 Frame = +2

Query: 677 PPPPXXXXKKKSTPXXRXXEXPRRDXKKFXGXXPPXKPPXXPLSFXXPLPN 829
           PPPP      K  P     + P+   ++     PP KPP    +   P P+
Sbjct: 56  PPPPPPPQPAKEPPPPTKPKHPKPKQQQHPPPPPPQKPPQGSTNLSLPNPS 106


>12_02_0640 - 21447470-21448309
          Length = 279

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = +2

Query: 671 RTPPPPXXXXKKKSTPXXRXXEXP 742
           RTPPPP    KK +TP     E P
Sbjct: 228 RTPPPPPGSPKKPATPGAVVVEQP 251


>12_02_0635 - 21430245-21431156
          Length = 303

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = +2

Query: 671 RTPPPPXXXXKKKSTPXXRXXEXP 742
           RTPPPP    KK +TP     E P
Sbjct: 225 RTPPPPPGSPKKPATPGAVVVEQP 248


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 14/50 (28%), Positives = 16/50 (32%)
 Frame = +2

Query: 677 PPPPXXXXKKKSTPXXRXXEXPRRDXKKFXGXXPPXKPPXXPLSFXXPLP 826
           PPPP      +S P       P  +        PP  PP  P     P P
Sbjct: 605 PPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPPPSLPNRLVPPPP 654


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,547,273
Number of Sequences: 37544
Number of extensions: 315499
Number of successful extensions: 578
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 568
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2858396560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)