Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_N17
(943 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 38 0.014
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 38 0.014
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 0.29
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 0.29
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 0.30
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 31 1.2
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 31 1.2
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 31 1.6
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.6
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.6
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p... 30 2.8
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 3.6
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 3.6
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 3.6
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 3.6
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 29 4.8
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 4.8
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 29 6.4
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 6.4
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 37.5 bits (83), Expect = 0.014
Identities = 37/146 (25%), Positives = 44/146 (30%), Gaps = 2/146 (1%)
Frame = +3
Query: 510 PPGXXGLAFGXXSXSPPHXPLAPGLXVGXXXXXPPKGGXRVSPKXGXXPGKNLXXKGPXK 689
PP G+A P P P PP G ++P+ P + P
Sbjct: 245 PPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPG--MTPRPPPPPSSGMWPPPPPP 302
Query: 690 GQKPXKXPGXGGRFSNRXXPPXXXXFKKIXPPXFXGWANPPXXFKXXPXGXXPXXXP--P 863
P + PG G PP + PP G PP P G P P P
Sbjct: 303 --PPGRTPGPPGMPGMPPPPPP----SRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYP 356
Query: 864 WXPPXXXPXPXXFTXKPXXPPFSPXG 941
P P P P PP P G
Sbjct: 357 SAGPGMYPPP-----PPSRPPAPPSG 377
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = +2
Query: 458 PXPGXGXXXFXGLXXXPXPXXXGXGFWXPXXFPPPXXPXPXXSGGGXGXXPP 613
P P G G+ P P G P +PPP P G G PP
Sbjct: 335 PPPPPGMRYPGGMPPPPPPRYPSAG---PGMYPPPPPSRPPAPPSGHGMIPP 383
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 37.5 bits (83), Expect = 0.014
Identities = 37/146 (25%), Positives = 44/146 (30%), Gaps = 2/146 (1%)
Frame = +3
Query: 510 PPGXXGLAFGXXSXSPPHXPLAPGLXVGXXXXXPPKGGXRVSPKXGXXPGKNLXXKGPXK 689
PP G+A P P P PP G ++P+ P + P
Sbjct: 255 PPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPG--MTPRPPPPPSSGMWPPPPPP 312
Query: 690 GQKPXKXPGXGGRFSNRXXPPXXXXFKKIXPPXFXGWANPPXXFKXXPXGXXPXXXP--P 863
P + PG G PP + PP G PP P G P P P
Sbjct: 313 --PPGRTPGPPGMPGMPPPPPP----SRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYP 366
Query: 864 WXPPXXXPXPXXFTXKPXXPPFSPXG 941
P P P P PP P G
Sbjct: 367 SAGPGMYPPP-----PPSRPPAPPSG 387
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = +2
Query: 458 PXPGXGXXXFXGLXXXPXPXXXGXGFWXPXXFPPPXXPXPXXSGGGXGXXPP 613
P P G G+ P P G P +PPP P G G PP
Sbjct: 345 PPPPPGMRYPGGMPPPPPPRYPSAG---PGMYPPPPPSRPPAPPSGHGMIPP 393
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect(2) = 0.29
Identities = 20/61 (32%), Positives = 21/61 (34%)
Frame = +2
Query: 743 PPPLGXXLQKNSAPQXXGVGXPPXGX*KXSXGFXPLXXPPXVXPPXXPXPXPVYXETXXP 922
PPP G P PP G S G P PP PP P P P + P
Sbjct: 729 PPPPGGLPPITGGPPPP---PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Query: 923 P 925
P
Sbjct: 786 P 786
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/61 (32%), Positives = 21/61 (34%), Gaps = 8/61 (13%)
Frame = +1
Query: 784 PXSRGGXTPXXXLKXXPGVXPPXKXPXGXPPXXXXP--------LAXLPGNPXSPLFPPL 939
P GG P L G PP P G PP P L + G P P PP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Query: 940 G 942
G
Sbjct: 767 G 767
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -2
Query: 648 PRXXGKPXFPPXGGXXPXPPPEXXGXGXXGG 556
P G P PP G P PPP G GG
Sbjct: 753 PISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 21.4 bits (43), Expect(2) = 0.29
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 554 PPPXXPXPXXSGGGXGXXPPXGG 622
PPP P +GG PP GG
Sbjct: 713 PPPPPGLPPITGGPP-PPPPPGG 734
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect(2) = 0.29
Identities = 20/61 (32%), Positives = 21/61 (34%)
Frame = +2
Query: 743 PPPLGXXLQKNSAPQXXGVGXPPXGX*KXSXGFXPLXXPPXVXPPXXPXPXPVYXETXXP 922
PPP G P PP G S G P PP PP P P P + P
Sbjct: 729 PPPPGGLPPITGGPPPP---PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Query: 923 P 925
P
Sbjct: 786 P 786
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/61 (32%), Positives = 21/61 (34%), Gaps = 8/61 (13%)
Frame = +1
Query: 784 PXSRGGXTPXXXLKXXPGVXPPXKXPXGXPPXXXXP--------LAXLPGNPXSPLFPPL 939
P GG P L G PP P G PP P L + G P P PP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Query: 940 G 942
G
Sbjct: 767 G 767
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -2
Query: 648 PRXXGKPXFPPXGGXXPXPPPEXXGXGXXGG 556
P G P PP G P PPP G GG
Sbjct: 753 PISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 21.4 bits (43), Expect(2) = 0.29
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 554 PPPXXPXPXXSGGGXGXXPPXGG 622
PPP P +GG PP GG
Sbjct: 713 PPPPPGLPPITGGPP-PPPPPGG 734
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect(2) = 0.30
Identities = 20/61 (32%), Positives = 21/61 (34%)
Frame = +2
Query: 743 PPPLGXXLQKNSAPQXXGVGXPPXGX*KXSXGFXPLXXPPXVXPPXXPXPXPVYXETXXP 922
PPP G P PP G S G P PP PP P P P + P
Sbjct: 312 PPPPGGLPPITGGPPPP---PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368
Query: 923 P 925
P
Sbjct: 369 P 369
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/61 (32%), Positives = 21/61 (34%), Gaps = 8/61 (13%)
Frame = +1
Query: 784 PXSRGGXTPXXXLKXXPGVXPPXKXPXGXPPXXXXP--------LAXLPGNPXSPLFPPL 939
P GG P L G PP P G PP P L + G P P PP
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 349
Query: 940 G 942
G
Sbjct: 350 G 350
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -2
Query: 648 PRXXGKPXFPPXGGXXPXPPPEXXGXGXXGG 556
P G P PP G P PPP G GG
Sbjct: 336 PISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
Score = 21.4 bits (43), Expect(2) = 0.30
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 554 PPPXXPXPXXSGGGXGXXPPXGG 622
PPP P +GG PP GG
Sbjct: 296 PPPPPGLPPITGGPP-PPPPPGG 317
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +2
Query: 524 GXGFWXPXXFPPPXXPXPXXSGGGXGXXPPXGG 622
G + PPP P P GGG G P GG
Sbjct: 53 GGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGG 85
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +2
Query: 524 GXGFWXPXXFPPPXXPXPXXSGGGXGXXPPXGG 622
G + PPP P P GGG G P GG
Sbjct: 53 GGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGG 85
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/54 (27%), Positives = 19/54 (35%)
Frame = +1
Query: 763 PSKKFXPPXSRGGXTPXXXLKXXPGVXPPXKXPXGXPPXXXXPLAXLPGNPXSP 924
P + P G P ++ G PP P G PP P P +P P
Sbjct: 723 PQQHPGPYPGYPGYGPPGAMRPPAGFAPPPGAPYGYPPGAPPPAGFHPSHPQHP 776
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.7 bits (66), Expect = 1.6
Identities = 29/118 (24%), Positives = 34/118 (28%)
Frame = +3
Query: 507 PPPGXXGLAFGXXSXSPPHXPLAPGLXVGXXXXXPPKGGXRVSPKXGXXPGKNLXXKGPX 686
PPP G + SPP P PP GG P+ G P P
Sbjct: 256 PPPPAAGSPPPPRTGSPPPPPTGS-------PPPPPAGGSPPPPRAGSPPPPPPPRGSPP 308
Query: 687 KGQKPXKXPGXGGRFSNRXXPPXXXXFKKIXPPXFXGWANPPXXFKXXPXGXXPXXXP 860
G P G + PP K+ P +PP P G P P
Sbjct: 309 TGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTG--SPPTGRPPRGGP 364
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.7 bits (66), Expect = 1.6
Identities = 29/118 (24%), Positives = 34/118 (28%)
Frame = +3
Query: 507 PPPGXXGLAFGXXSXSPPHXPLAPGLXVGXXXXXPPKGGXRVSPKXGXXPGKNLXXKGPX 686
PPP G + SPP P PP GG P+ G P P
Sbjct: 277 PPPPAAGSPPPPRTGSPPPPPTGS-------PPPPPAGGSPPPPRAGSPPPPPPPRGSPP 329
Query: 687 KGQKPXKXPGXGGRFSNRXXPPXXXXFKKIXPPXFXGWANPPXXFKXXPXGXXPXXXP 860
G P G + PP K+ P +PP P G P P
Sbjct: 330 TGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTG--SPPTGRPPRGGP 385
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.7 bits (66), Expect = 1.6
Identities = 29/118 (24%), Positives = 34/118 (28%)
Frame = +3
Query: 507 PPPGXXGLAFGXXSXSPPHXPLAPGLXVGXXXXXPPKGGXRVSPKXGXXPGKNLXXKGPX 686
PPP G + SPP P PP GG P+ G P P
Sbjct: 262 PPPPAAGSPPPPRTGSPPPPPTGS-------PPPPPAGGSPPPPRAGSPPPPPPPRGSPP 314
Query: 687 KGQKPXKXPGXGGRFSNRXXPPXXXXFKKIXPPXFXGWANPPXXFKXXPXGXXPXXXP 860
G P G + PP K+ P +PP P G P P
Sbjct: 315 TGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTG--SPPTGRPPRGGP 370
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 612 GGXXPXPPPEXXGXGXXGGGNXXG 541
GG P PPP G G GGG G
Sbjct: 50 GGCAPPPPPPACGGGCGGGGGGCG 73
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 612 GGXXPXPPPEXXGXGXXGGGNXXG 541
GG P PPP G G GGG G
Sbjct: 107 GGCAPPPPPPACGGGCGGGGGGCG 130
>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
H05L14.2 protein.
Length = 2162
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +1
Query: 844 PPXKXPXGXPPXXXXPLAXLPGNPXSPLFPPLG 942
PP P G PP P+ G P P FPP+G
Sbjct: 1013 PPIIRPFGAPPPQFIPIQSNYGRP--PQFPPIG 1043
>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +1
Query: 844 PPXKXPXGXPPXXXXPLAXLPGNPXSPLFPPLG 942
PP P G PP P+ G P P FPP+G
Sbjct: 1013 PPIIRPFGAPPPQFIPIQSNYGRP--PQFPPIG 1043
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -2
Query: 654 GXPRXXGKPXFPPXGGXXPXPPPEXXGXGXXGGGNXXGXQKP 529
G P G PP G PPP G G GG G P
Sbjct: 181 GGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPGGMLP 222
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -2
Query: 654 GXPRXXGKPXFPPXGGXXPXPPPEXXGXGXXGGGNXXGXQKP 529
G P G PP G PPP G G GG G P
Sbjct: 461 GGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPGGMLP 502
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = -2
Query: 633 KPXFPPXGGXXPXPPPEXXGXGXXGGGNXXGXQKPXPXXXGXG 505
+P PP G P PPP G GN ++P P G G
Sbjct: 32 RPPPPPKGTGTPPPPPTGEPQDLSGEGN--ASRRPPPPPKGTG 72
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = -2
Query: 633 KPXFPPXGGXXPXPPPEXXGXGXXGGGNXXGXQKPXPXXXGXG 505
+P PP G P PPP G GN ++P P G G
Sbjct: 95 RPPPPPKGTGTPPPPPTGEPQDLSGEGN--ASRRPPPPPKGTG 135
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = -2
Query: 633 KPXFPPXGGXXPXPPPEXXGXGXXGGGNXXGXQKPXPXXXGXG 505
+P PP G P PPP G GN ++P P G G
Sbjct: 126 RPPPPPKGTGSPPPPPTGEPQDLSGEGN--ASRRPPPPPKGTG 166
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = -2
Query: 633 KPXFPPXGGXXPXPPPEXXGXGXXGGGNXXGXQKPXPXXXGXG 505
+P PP G P PPP G GN ++P P G G
Sbjct: 219 RPPPPPKGTGSPTPPPTGEPQDLSGEGN--ASRRPPPPPKGTG 259
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = -2
Query: 633 KPXFPPXGGXXPXPPPEXXGXGXXGGGNXXGXQKPXPXXXGXG 505
+P PP G P PPP G GN ++P P G G
Sbjct: 250 RPPPPPKGTGSPPPPPTGEPQDLSGEGN--ASRRPPPPPKGTG 290
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.5 bits (63), Expect = 3.6
Identities = 33/121 (27%), Positives = 35/121 (28%), Gaps = 2/121 (1%)
Frame = +3
Query: 507 PPPGXXGLAFGXXSXSPPHXPLAPGLXVGXXXXXPPKGGXRVSPKXGXXPGKNLXXKGPX 686
P P G F P P GL G PP P G PG P
Sbjct: 669 PHPPPMGFPFQHQLTQLPGQPRPAGLPPGV----PPMFNLNAPPPPGI-PGYPPAPPPPG 723
Query: 687 KGQKPXKXPGXGGRFSNRXXPPXXXX-FKK-IXPPXFXGWANPPXXFKXXPXGXXPXXXP 860
G P + G N+ PP F PP F A P F P G P
Sbjct: 724 VGPPPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPPPFGRGAGPMSSFPPPPRGGMHHMPP 783
Query: 861 P 863
P
Sbjct: 784 P 784
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 29.1 bits (62), Expect = 4.8
Identities = 24/90 (26%), Positives = 26/90 (28%), Gaps = 2/90 (2%)
Frame = +2
Query: 554 PPPXXPXPXXSGGGXGXXPPXGGXXGFPXXRGXXXXXXXXXXXXXG--PETRKXARXGWA 727
PPP P P GGG G P P G G A G
Sbjct: 31 PPPPPPSPCGCGGGGGLALPQLPPLSLPSLGGGGGCCPPPAPACGGGCGGGVAPAPIGGG 90
Query: 728 FFQ*XPPPLGXXLQKNSAPQXXGVGXPPXG 817
+ Q P+G AP G G P G
Sbjct: 91 YAQAPQAPIGGGYAAPQAPIGGGYGGAPIG 120
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 554 PPPXXPXPXXSGGGXGXXPPXGGXXG 631
PPP P P GG PP GG G
Sbjct: 576 PPPPPPPPPMLGGPPPPPPPPGGLMG 601
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = -1
Query: 658 PGXXPXXGETRXPPXGGXXXXXPTXXPGARGXWGGEXXXXPKAXPXXPGG 509
PG P G P PG G GG P P PGG
Sbjct: 190 PGQGGQRSRGTPGPAGAPGPQGPAGGPGQPGQSGGAGAPGPAGAPGAPGG 239
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = -1
Query: 658 PGXXPXXGETRXPPXGGXXXXXPTXXPGARGXWGGEXXXXPKAXPXXPGG 509
PG P G P PG G GG P P PGG
Sbjct: 190 PGQGGQRSRGTPGPSGAPGPQGPAGGPGQPGQSGGAGAPGPAGAPGAPGG 239
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +1
Query: 832 PGVXPPXKXPXGXPPXXXXPLAXLPGNPXSPLFPP 936
P PP P G PP P + LPG +P PP
Sbjct: 57 PSSPPPAPRPSGQPPGPQGP-SDLPGPSGAPPGPP 90
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,815,707
Number of Sequences: 27780
Number of extensions: 265410
Number of successful extensions: 1177
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1037
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2433684176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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