Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_N14
         (870 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118515-1|AAM49884.1|   66|Drosophila melanogaster LD14731p pro...    48   2e-05
AE013599-996|AAO41466.1|   66|Drosophila melanogaster CG2249-PB,...    48   2e-05
AE013599-995|AAF58857.2|   66|Drosophila melanogaster CG2249-PA,...    48   2e-05

>AY118515-1|AAM49884.1|   66|Drosophila melanogaster LD14731p
           protein.
          Length = 66

 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 21/51 (41%), Positives = 31/51 (60%)
 Frame = +3

Query: 171 VGKNVVKTSVRSGSNGGIPGENLPFDINNKARLTFHMFWFFGSGFAAPFLV 323
           + +N  ++ VR   +GG+PGENLPF + NK R+T         GF +PFL+
Sbjct: 8   IARNFSQSMVRFSGHGGVPGENLPFGLTNKYRITALFTIGCVLGFGSPFLI 58


>AE013599-996|AAO41466.1|   66|Drosophila melanogaster CG2249-PB,
           isoform B protein.
          Length = 66

 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 21/51 (41%), Positives = 31/51 (60%)
 Frame = +3

Query: 171 VGKNVVKTSVRSGSNGGIPGENLPFDINNKARLTFHMFWFFGSGFAAPFLV 323
           + +N  ++ VR   +GG+PGENLPF + NK R+T         GF +PFL+
Sbjct: 8   IARNFSQSMVRFSGHGGVPGENLPFGLTNKYRITALFTIGCVLGFGSPFLI 58


>AE013599-995|AAF58857.2|   66|Drosophila melanogaster CG2249-PA,
           isoform A protein.
          Length = 66

 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 21/51 (41%), Positives = 31/51 (60%)
 Frame = +3

Query: 171 VGKNVVKTSVRSGSNGGIPGENLPFDINNKARLTFHMFWFFGSGFAAPFLV 323
           + +N  ++ VR   +GG+PGENLPF + NK R+T         GF +PFL+
Sbjct: 8   IARNFSQSMVRFSGHGGVPGENLPFGLTNKYRITALFTIGCVLGFGSPFLI 58


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,200,438
Number of Sequences: 53049
Number of extensions: 442227
Number of successful extensions: 814
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4209111660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)