Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_N12
(870 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 36 0.007
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 35 0.017
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 33 0.040
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 33 0.040
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 33 0.053
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 33 0.053
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 32 0.092
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 31 0.28
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 30 0.37
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 30 0.37
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 29 0.65
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 27 4.6
SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 26 8.0
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 35.9 bits (79), Expect = 0.007
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -3
Query: 535 GEKKYKCEI--CSKGFLSSGGLTYHKKKHTASKDFKCDQCIAAF 410
G+ +YKC+ C+K F H + HT SK F C C ++F
Sbjct: 13 GDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSF 56
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 34.7 bits (76), Expect = 0.017
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 544 FFLGEKKYKCEICSKGFLSSGGLTYHK 464
F + K Y+CE+CSK + + GL YH+
Sbjct: 392 FVVENKPYRCEVCSKRYKNLNGLKYHR 418
Score = 28.7 bits (61), Expect = 1.1
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = -3
Query: 532 EKKYKCEI--CSKGFLSSGGLTYHK 464
+K YKC + C K + + GL YHK
Sbjct: 347 DKPYKCPVPNCDKAYKNQNGLKYHK 371
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 33.5 bits (73), Expect = 0.040
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = -3
Query: 538 LGEKKYKCEICSKGFLSSGGLTYHKKKHTASKDFKCDQCIAAF 410
L ++ Y+C++C GF+ L H + H + + C +C+ F
Sbjct: 468 LSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVC-ECLKRF 509
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = -3
Query: 526 KYKCEI--CSKGFLSSGGLTYHKKKHTASKDFKCDQCIAAFV 407
KY C C+K + H + H + + ++CD C A FV
Sbjct: 442 KYVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFV 483
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 33.5 bits (73), Expect = 0.040
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -3
Query: 529 KKYKCEICSKGFLSSGGLTYHKKKHTASKDFKCDQ 425
K+Y CE C++ F L H + HT K F C +
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSE 102
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 33.1 bits (72), Expect = 0.053
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = -3
Query: 532 EKKYKCEI--CSKGFLSSGGLTYHKKKHTASKDFKC--DQCIAAF 410
E+ + C+ CSK F L HK+ HT K F C D C A F
Sbjct: 50 ERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQF 94
Score = 26.2 bits (55), Expect = 6.1
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 126 ALKRHVAIHNFGKKKIKCESCEMSF 52
ALK+H+++ + G C+SC F
Sbjct: 252 ALKKHISVIHEGNMAFHCDSCGTKF 276
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 33.1 bits (72), Expect = 0.053
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -3
Query: 526 KYKCEICSKGFLSSGGLTYHKKKHTASKDFKCD 428
+Y+C C +GF L H HT + F CD
Sbjct: 467 RYRCTECLQGFSRPSSLKIHTYSHTGERPFVCD 499
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 32.3 bits (70), Expect = 0.092
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = -3
Query: 529 KKYKCEICSKGFLSSGGLTYHKKKHTASKDFKCDQCIAAF 410
+ ++C IC K F H++ HT K F C C F
Sbjct: 598 RPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRF 637
Score = 27.1 bits (57), Expect = 3.5
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -3
Query: 508 CSKGFLSSGGLTYHKKKHTASKDFKCDQCIAAF 410
C+K F + L H HT + F+C C +F
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSF 609
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 30.7 bits (66), Expect = 0.28
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -3
Query: 529 KKYKCEICSKGFLSSGGLTYHKKKHTASKDFKC 431
+ YKC +C+K F T H + HT K C
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVC 56
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 30.3 bits (65), Expect = 0.37
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = -3
Query: 538 LGEKKYKCEI--CSKGFLSSGGLTYHKKKHTASKDFKCDQCIAAF 410
LG+ ++ C C K F L H++ H K F C C AF
Sbjct: 21 LGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAF 65
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 30.3 bits (65), Expect = 0.37
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -3
Query: 532 EKKYKCEICSKGFLSSGGLTYHKKKHTASKDFKCDQC 422
++ + C+ C+K F LT HK H+ ++ C C
Sbjct: 28 KRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYC 64
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 29.5 bits (63), Expect = 0.65
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = -3
Query: 529 KKYKCEICSKGFLSSGGLTYHKKKHTASKDFKC 431
K Y+C C + F H + HT K F+C
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFEC 34
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 26.6 bits (56), Expect = 4.6
Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Frame = -3
Query: 517 CEICSKGFLSSGGLTYH--KKKH 455
CE+C+K F S G + H KKH
Sbjct: 72 CEVCNKKFYSEGAYSSHMASKKH 94
>SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 478
Score = 25.8 bits (54), Expect = 8.0
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -3
Query: 523 YKCEICSKGFLSSGGLTYHKKKH 455
++C+ C F+ GLT HK+ +
Sbjct: 139 FRCDKCDMMFVKQSGLTNHKRTY 161
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,404,356
Number of Sequences: 5004
Number of extensions: 69139
Number of successful extensions: 136
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 136
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 434475230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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