Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_N12
         (870 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    44   6e-06
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    25   3.0  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   5.2  
AJ304406-1|CAC35454.1|  131|Anopheles gambiae putative epidermal...    23   9.2  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 44.0 bits (99), Expect = 6e-06
 Identities = 19/42 (45%), Positives = 22/42 (52%)
 Frame = -3

Query: 535 GEKKYKCEICSKGFLSSGGLTYHKKKHTASKDFKCDQCIAAF 410
           GEK Y+CE C    +S   L  H   HT  K +KCDQC   F
Sbjct: 351 GEKCYRCEYCPYASISMRHLESHLLLHTDQKPYKCDQCAQTF 392



 Score = 38.7 bits (86), Expect = 2e-04
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = -3

Query: 535 GEKKYKCEICSKGFLSSGGLTYHKKKHTASKDFKCDQCIAAF 410
           GEK ++C  C+        LT H + HT  K + CD C A F
Sbjct: 236 GEKPFQCPHCTYASPDKFKLTRHMRIHTGEKPYSCDVCFARF 277



 Score = 37.5 bits (83), Expect = 5e-04
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -3

Query: 532 EKKYKCEICSKGFLSSGGLTYHKKKHTASKDFKCDQCIAAF 410
           ++ +KC +C +GF +   L  H   HT +K  +C  C   F
Sbjct: 152 DRPHKCVVCERGFKTLASLQNHVNTHTGTKPHRCKHCDNCF 192



 Score = 33.9 bits (74), Expect = 0.006
 Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
 Frame = -3

Query: 535 GEKKYKCEICSKGFLSSGGLTYHKKKHTASKD--FKCDQC 422
           GEK Y C++C   F  S  L  HK  H       F+C  C
Sbjct: 264 GEKPYSCDVCFARFTQSNSLKAHKMIHQVGNKPVFQCKLC 303



 Score = 32.3 bits (70), Expect = 0.020
 Identities = 14/46 (30%), Positives = 20/46 (43%)
 Frame = -3

Query: 550 RFFFLGEKKYKCEICSKGFLSSGGLTYHKKKHTASKDFKCDQCIAA 413
           R+    E+ +KC  C    +    L  H + HT  K F+C  C  A
Sbjct: 203 RYRHTHERPHKCTECDYASVELSKLKRHIRTHTGEKPFQCPHCTYA 248



 Score = 31.1 bits (67), Expect = 0.046
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = -1

Query: 138 P*KFALKRHVAIHNFGKKKIKCESCEMSFHNSN 40
           P KF L RH+ IH  G+K   C+ C   F  SN
Sbjct: 250 PDKFKLTRHMRIHT-GEKPYSCDVCFARFTQSN 281



 Score = 30.7 bits (66), Expect = 0.060
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = -3

Query: 532 EKKYKCEICSKGFLSSGGLTYHKKKHTASKDFKCDQCIAAFVN*R 398
           +K  KC+ C   F        H K H   K ++C+ C  A ++ R
Sbjct: 324 DKPIKCKRCDSTFPDRYSYKMHAKTHEGEKCYRCEYCPYASISMR 368



 Score = 27.1 bits (57), Expect = 0.74
 Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = -3

Query: 523 YKCEICSKGFLSSGGLTYHKKK-HTASKDFKCDQCIAAF 410
           ++C++C         L  H +  HTA K  KC +C + F
Sbjct: 298 FQCKLCPTTCGRKTDLRIHVQNLHTADKPIKCKRCDSTF 336


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +1

Query: 133 LRKREKKNNYYTTNENQPSGHFTSRPISEL*ARPTIYAIKK 255
           LR  ++  +Y T +E     HFTSR    L A+  I+   K
Sbjct: 76  LRLVQQAKSYITRHEGALQEHFTSRTARSLLAQFNIFLTTK 116


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 18/77 (23%), Positives = 36/77 (46%)
 Frame = +3

Query: 135  KEKRKKKQLLYHKRKPTEWTFHFTSDK*AVSSSNHLRNKKKSDMHLICHACRLHRTVEPR 314
            +E RK    L H ++PT+  FH  ++    +S+++L      + H + +    H T    
Sbjct: 3054 QEDRKVNPYLKHHKRPTKTPFHI-ANCFRTNSADNLNTITCYEQHGLSYVFP-HNTSNIS 3111

Query: 315  GYNSKKNYAQCVRYKLN 365
            G  ++ +Y+ C   + N
Sbjct: 3112 GI-TEDHYSSCYPIEYN 3127


>AJ304406-1|CAC35454.1|  131|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 131

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 439 NPLRRCVFSCGMLSLPKTKTLYYK 510
           N +R C+ + G +S+P  +  +YK
Sbjct: 36  NEMRVCIGTNGRMSVPANREYHYK 59


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 865,253
Number of Sequences: 2352
Number of extensions: 17008
Number of successful extensions: 240
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 240
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93026475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)