Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_N10
(880 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF132969-1|AAD27744.1| 198|Homo sapiens CGI-35 protein protein. 216 1e-55
BC080600-1|AAH80600.1| 109|Homo sapiens FCF1 protein protein. 97 7e-20
BC022441-1|AAH22441.1| 249|Homo sapiens chromosome 8 open readi... 39 0.027
BC005955-1|AAH05955.1| 249|Homo sapiens chromosome 8 open readi... 39 0.027
AK055279-1|BAB70896.1| 145|Homo sapiens protein ( Homo sapiens ... 39 0.027
BC117389-1|AAI17390.1| 499|Homo sapiens PRP31 pre-mRNA processi... 34 0.59
AY040822-1|AAK77986.1| 499|Homo sapiens U4/U6 snRNP-associated ... 34 0.59
AK098547-1|BAC05329.1| 364|Homo sapiens protein ( Homo sapiens ... 34 0.59
AF308303-1|AAG48270.1| 278|Homo sapiens serologically defined b... 34 0.78
AK131529-1|BAD18667.1| 879|Homo sapiens protein ( Homo sapiens ... 30 9.6
AB014541-1|BAA31616.2| 1326|Homo sapiens KIAA0641 protein protein. 30 9.6
>AF132969-1|AAD27744.1| 198|Homo sapiens CGI-35 protein protein.
Length = 198
Score = 216 bits (527), Expect = 1e-55
Identities = 101/150 (67%), Positives = 120/150 (80%)
Frame = +2
Query: 341 MGKQRKTRKIVEKRFAKMKKMINPSDSRIKNSERSEPKKKKPVDPHVIKIREVPQTSSAL 520
MGKQ+KTRK +A MK+M++ D R+K +R +PKKK+ DP +K REVPQ S L
Sbjct: 1 MGKQKKTRK-----YATMKRMLSLRDQRLKEKDRLKPKKKEKKDPSALKEREVPQHPSCL 55
Query: 521 FFQYNMQLGPPYHVLIDTNFINFSIKNKLDIIQNMMDCLYAKCIPYITDCVLGELEKLGR 700
FFQYN QLGPPYH+L+DTNFINFSIK KLD++Q+MMDCLYAKCIP ITDCV+ E+EKLG+
Sbjct: 56 FFQYNTQLGPPYHILVDTNFINFSIKAKLDLVQSMMDCLYAKCIPCITDCVMAEIEKLGQ 115
Query: 701 KYRVALRIIKDPRFERIACLVFXKGTYADD 790
KYRVALRI KDPRFER+ C KGTYADD
Sbjct: 116 KYRVALRIAKDPRFERLPCT--HKGTYADD 143
Score = 36.7 bits (81), Expect = 0.11
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +3
Query: 792 CLVQRVTXHKCYIVAT 839
CLVQRVT HKCYIVAT
Sbjct: 144 CLVQRVTQHKCYIVAT 159
>BC080600-1|AAH80600.1| 109|Homo sapiens FCF1 protein protein.
Length = 109
Score = 97.1 bits (231), Expect = 7e-20
Identities = 44/56 (78%), Positives = 48/56 (85%)
Frame = +2
Query: 623 MMDCLYAKCIPYITDCVLGELEKLGRKYRVALRIIKDPRFERIACLVFXKGTYADD 790
MMDCLYAKCIP ITDCV+ E+EKLG+KYRVALRI KDPRFER+ C KGTYADD
Sbjct: 1 MMDCLYAKCIPCITDCVMAEIEKLGQKYRVALRIAKDPRFERLPCT--HKGTYADD 54
Score = 36.7 bits (81), Expect = 0.11
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +3
Query: 792 CLVQRVTXHKCYIVAT 839
CLVQRVT HKCYIVAT
Sbjct: 55 CLVQRVTQHKCYIVAT 70
>BC022441-1|AAH22441.1| 249|Homo sapiens chromosome 8 open reading
frame 53 protein.
Length = 249
Score = 38.7 bits (86), Expect = 0.027
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +2
Query: 521 FFQYNMQLGPPYHVLIDTNFINFSIKNKLDIIQNMMDCLYAKCIPYITDCVLGELEKLGR 700
FF+ N + PY +L+D F +++ ++ + + + L + T CVL ELE LG+
Sbjct: 15 FFRNNFGVREPYQILLDGTFCQAALRGRIQLREQLPRYLMGETQLCTTRCVLKELETLGK 74
>BC005955-1|AAH05955.1| 249|Homo sapiens chromosome 8 open reading
frame 53 protein.
Length = 249
Score = 38.7 bits (86), Expect = 0.027
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +2
Query: 521 FFQYNMQLGPPYHVLIDTNFINFSIKNKLDIIQNMMDCLYAKCIPYITDCVLGELEKLGR 700
FF+ N + PY +L+D F +++ ++ + + + L + T CVL ELE LG+
Sbjct: 15 FFRNNFGVREPYQILLDGTFCQAALRGRIQLREQLPRYLMGETQLCTTRCVLKELETLGK 74
>AK055279-1|BAB70896.1| 145|Homo sapiens protein ( Homo sapiens
cDNA FLJ30717 fis, clone FCBBF2001672. ).
Length = 145
Score = 38.7 bits (86), Expect = 0.027
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +2
Query: 521 FFQYNMQLGPPYHVLIDTNFINFSIKNKLDIIQNMMDCLYAKCIPYITDCVLGELEKLGR 700
FF+ N + PY +L+D F +++ ++ + + + L + T CVL ELE LG+
Sbjct: 15 FFRNNFGVREPYQILLDGTFCQAALRGRIQLREQLPRYLMGETQLCTTRCVLKELETLGK 74
>BC117389-1|AAI17390.1| 499|Homo sapiens PRP31 pre-mRNA processing
factor 31 homolog (S. cerevisiae) protein.
Length = 499
Score = 34.3 bits (75), Expect = 0.59
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +2
Query: 479 VIKIRE-VPQTSSALFFQYNMQLGPPYHVLIDTNFINFSIKNKLDIIQNMMDCLYAKCIP 655
++KI E + + + A ++ P Y V++D N + I+N+L+II + Y+K P
Sbjct: 64 MMKIEEYISKQAKASEVMGPVEAAPEYRVIVDANNLTVEIENELNIIHKFIRDKYSKRFP 123
Query: 656 YITDCVLGELE 688
+ V L+
Sbjct: 124 ELESLVPNALD 134
>AY040822-1|AAK77986.1| 499|Homo sapiens U4/U6 snRNP-associated 61
kDa protein protein.
Length = 499
Score = 34.3 bits (75), Expect = 0.59
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +2
Query: 479 VIKIRE-VPQTSSALFFQYNMQLGPPYHVLIDTNFINFSIKNKLDIIQNMMDCLYAKCIP 655
++KI E + + + A ++ P Y V++D N + I+N+L+II + Y+K P
Sbjct: 64 MMKIEEYISKQAKASEVMGPVEAAPEYRVIVDANNLTVEIENELNIIHKFIRDKYSKRFP 123
Query: 656 YITDCVLGELE 688
+ V L+
Sbjct: 124 ELESLVPNALD 134
>AK098547-1|BAC05329.1| 364|Homo sapiens protein ( Homo sapiens
cDNA FLJ25681 fis, clone TST04131. ).
Length = 364
Score = 34.3 bits (75), Expect = 0.59
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +2
Query: 479 VIKIRE-VPQTSSALFFQYNMQLGPPYHVLIDTNFINFSIKNKLDIIQNMMDCLYAKCIP 655
++KI E + + + A ++ P Y V++D N + I+N+L+II + Y+K P
Sbjct: 64 MMKIEEYISKQAKASEVMGPVEAAPEYRVIVDANNLTVEIENELNIIHKFIRDKYSKRFP 123
Query: 656 YITDCVLGELE 688
+ V L+
Sbjct: 124 ELESLVPNALD 134
>AF308303-1|AAG48270.1| 278|Homo sapiens serologically defined
breast cancer antigen NY-BR-99 protein.
Length = 278
Score = 33.9 bits (74), Expect = 0.78
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 536 MQLGPPYHVLIDTNFINFSIKNKLDIIQNMMDCLYAKCIPYITDCVLGELE 688
++ P Y V++D N + I+N+L+II + Y+K P + V L+
Sbjct: 4 VEAAPEYRVIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALD 54
>AK131529-1|BAD18667.1| 879|Homo sapiens protein ( Homo sapiens
cDNA FLJ16758 fis, clone BRACE3038687, moderately
similar to Homo sapiens apoptosis-associated tyrosine
kinase (AATK). ).
Length = 879
Score = 30.3 bits (65), Expect = 9.6
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Frame = +2
Query: 620 NMMDCLY--AKCIPYITD---CVLGELEKLGRKYRVALRIIKDPR-FERIACLV 763
N++ CL A+ PY+ C LG+L+ R RVA + DPR +R+AC V
Sbjct: 184 NLLQCLAQCAEVTPYLLVMEFCPLGDLKGYLRSCRVAESMAPDPRTLQRMACEV 237
>AB014541-1|BAA31616.2| 1326|Homo sapiens KIAA0641 protein protein.
Length = 1326
Score = 30.3 bits (65), Expect = 9.6
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Frame = +2
Query: 620 NMMDCLY--AKCIPYITD---CVLGELEKLGRKYRVALRIIKDPR-FERIACLV 763
N++ CL A+ PY+ C LG+L+ R RVA + DPR +R+AC V
Sbjct: 136 NLLQCLAQCAEVTPYLLVMEFCPLGDLKGYLRSCRVAESMAPDPRTLQRMACEV 189
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,805,160
Number of Sequences: 237096
Number of extensions: 2426801
Number of successful extensions: 4177
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4176
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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