Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_N10
(880 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81072-6|CAB03017.2| 196|Caenorhabditis elegans Hypothetical pr... 152 3e-37
U10402-1|AAK67218.1| 232|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AL132863-10|CAN99717.1| 181|Caenorhabditis elegans Hypothetical... 31 1.4
Z70751-4|CAI91168.1| 497|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z70751-3|CAA94752.1| 529|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z70750-18|CAI91163.1| 497|Caenorhabditis elegans Hypothetical p... 30 1.9
Z70750-17|CAA94749.1| 529|Caenorhabditis elegans Hypothetical p... 30 1.9
Z81475-3|CAB03909.1| 303|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z70753-9|CAA94765.1| 502|Caenorhabditis elegans Hypothetical pr... 30 2.5
AF016659-2|AAB66046.3| 91|Caenorhabditis elegans Hypothetical ... 30 2.5
Z83218-7|CAB05685.2| 283|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z83216-3|CAB05674.2| 232|Caenorhabditis elegans Hypothetical pr... 29 5.8
AC006777-7|AAK72306.2| 367|Caenorhabditis elegans Seven tm rece... 29 5.8
Z81553-7|CAB04496.4| 797|Caenorhabditis elegans Hypothetical pr... 28 7.7
AL132948-28|CAD31828.1| 263|Caenorhabditis elegans Hypothetical... 28 7.7
AC006769-9|AAF60585.2| 779|Caenorhabditis elegans Hypothetical ... 28 7.7
AC006645-2|AAF39844.2| 796|Caenorhabditis elegans Hypothetical ... 28 7.7
>Z81072-6|CAB03017.2| 196|Caenorhabditis elegans Hypothetical
protein F30A10.9 protein.
Length = 196
Score = 152 bits (369), Expect = 3e-37
Identities = 72/150 (48%), Positives = 106/150 (70%)
Frame = +2
Query: 341 MGKQRKTRKIVEKRFAKMKKMINPSDSRIKNSERSEPKKKKPVDPHVIKIREVPQTSSAL 520
MGK+ K+ R + + K++ +D+RIK +R K VD +K+ P+ SSA+
Sbjct: 1 MGKRLKSNA----RKSAVNKLVKKTDNRIKEEQRVIRTPK--VDEQELKLVRAPKISSAM 54
Query: 521 FFQYNMQLGPPYHVLIDTNFINFSIKNKLDIIQNMMDCLYAKCIPYITDCVLGELEKLGR 700
F +YN QLGPP+HV++DTNF+NF++KN++D+ Q MDCL+AK I Y TDCVL ELEK+ R
Sbjct: 55 FMKYNTQLGPPFHVIVDTNFVNFAVKNRIDMFQGFMDCLFAKTIVYATDCVLAELEKV-R 113
Query: 701 KYRVALRIIKDPRFERIACLVFXKGTYADD 790
++++AL+++KDPR +R+ C KGTYADD
Sbjct: 114 RFKIALKVLKDPRVQRLKC--EHKGTYADD 141
Score = 36.7 bits (81), Expect = 0.022
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +3
Query: 792 CLVQRVTXHKCYIVAT 839
CLVQRVT HKCYIVAT
Sbjct: 142 CLVQRVTQHKCYIVAT 157
>U10402-1|AAK67218.1| 232|Caenorhabditis elegans Hypothetical
protein C34E10.10 protein.
Length = 232
Score = 50.4 bits (115), Expect = 2e-06
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Frame = +2
Query: 482 IKIREVPQTSSAL-FFQYNMQLGPPYHVLIDTNFINFSIKNKLDIIQNMMDCLYAKCIPY 658
+K++ + + + L F++YN + PY VL+D F N +++ KL++ + + L +
Sbjct: 1 MKVKRLKRANRLLTFYKYNYKFVAPYRVLVDGTFCNAALQEKLNLAEQIPKYLTEETHLM 60
Query: 659 ITDCVLGELEKLGRKYRVALRIIKDPRFERIAC 757
T+CVL ELEK G A I K +FE C
Sbjct: 61 TTNCVLKELEKFGPLLYGAFVIAK--QFEIAEC 91
>AL132863-10|CAN99717.1| 181|Caenorhabditis elegans Hypothetical
protein Y37H2A.14 protein.
Length = 181
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +2
Query: 350 QRKTRKIVEKRFAKMKKMINPSDSRIKNSERSEPKKKKPVDPHVIKIREVPQT 508
Q+KT K + + +++ +S++K ++++ K KKP V+++ PQT
Sbjct: 97 QKKTNKEIVEVAPEVRDEAPQLESQVKKPKKTQKKLKKPSYREVVEVSTEPQT 149
>Z70751-4|CAI91168.1| 497|Caenorhabditis elegans Hypothetical
protein F11A3.2b protein.
Length = 497
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/66 (28%), Positives = 29/66 (43%)
Frame = +2
Query: 347 KQRKTRKIVEKRFAKMKKMINPSDSRIKNSERSEPKKKKPVDPHVIKIREVPQTSSALFF 526
K RK K EK+ K + N + + +++ KK+KP H VP S+
Sbjct: 41 KARKAAKAAEKKARAEKSVANKAAAAAGSTQNQGQKKEKPPKEH----SAVPSESTTKLI 96
Query: 527 QYNMQL 544
+ N QL
Sbjct: 97 EENAQL 102
>Z70751-3|CAA94752.1| 529|Caenorhabditis elegans Hypothetical
protein F11A3.2a protein.
Length = 529
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/66 (28%), Positives = 29/66 (43%)
Frame = +2
Query: 347 KQRKTRKIVEKRFAKMKKMINPSDSRIKNSERSEPKKKKPVDPHVIKIREVPQTSSALFF 526
K RK K EK+ K + N + + +++ KK+KP H VP S+
Sbjct: 73 KARKAAKAAEKKARAEKSVANKAAAAAGSTQNQGQKKEKPPKEH----SAVPSESTTKLI 128
Query: 527 QYNMQL 544
+ N QL
Sbjct: 129 EENAQL 134
>Z70750-18|CAI91163.1| 497|Caenorhabditis elegans Hypothetical
protein F11A3.2b protein.
Length = 497
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/66 (28%), Positives = 29/66 (43%)
Frame = +2
Query: 347 KQRKTRKIVEKRFAKMKKMINPSDSRIKNSERSEPKKKKPVDPHVIKIREVPQTSSALFF 526
K RK K EK+ K + N + + +++ KK+KP H VP S+
Sbjct: 41 KARKAAKAAEKKARAEKSVANKAAAAAGSTQNQGQKKEKPPKEH----SAVPSESTTKLI 96
Query: 527 QYNMQL 544
+ N QL
Sbjct: 97 EENAQL 102
>Z70750-17|CAA94749.1| 529|Caenorhabditis elegans Hypothetical
protein F11A3.2a protein.
Length = 529
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/66 (28%), Positives = 29/66 (43%)
Frame = +2
Query: 347 KQRKTRKIVEKRFAKMKKMINPSDSRIKNSERSEPKKKKPVDPHVIKIREVPQTSSALFF 526
K RK K EK+ K + N + + +++ KK+KP H VP S+
Sbjct: 73 KARKAAKAAEKKARAEKSVANKAAAAAGSTQNQGQKKEKPPKEH----SAVPSESTTKLI 128
Query: 527 QYNMQL 544
+ N QL
Sbjct: 129 EENAQL 134
>Z81475-3|CAB03909.1| 303|Caenorhabditis elegans Hypothetical
protein C24H11.3 protein.
Length = 303
Score = 29.9 bits (64), Expect = 2.5
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = +2
Query: 413 SDSRIKNSERSEPKKKKPVDPHVIKIR-EVPQTSSALFFQYNMQLGPPYH-VLIDTNFIN 586
SDS +NSE S PK+ K V P I + ++PQ + +F N Y N
Sbjct: 203 SDS--ENSENSPPKRSKLVTPPTISPQIDLPQ-QTPYYFNQNFVAPQNYQPQFASAQNYN 259
Query: 587 FSIKNKLDIIQNM 625
F ++N + NM
Sbjct: 260 FEVQNNAQLAWNM 272
>Z70753-9|CAA94765.1| 502|Caenorhabditis elegans Hypothetical
protein F40F9.10 protein.
Length = 502
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 353 RKTRKIVEKRFAKMKKMINPSDSRIKNSERSEPKKKK 463
+KT K+ +K A+ KK P+D + K + + PKKKK
Sbjct: 306 QKTEKVEKKVVAEKKK--KPADGKEKTDKDAAPKKKK 340
>AF016659-2|AAB66046.3| 91|Caenorhabditis elegans Hypothetical
protein F40E12.1 protein.
Length = 91
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 368 IVEKRFAKMKKMINPSDSRIKNSERSEPKKKKPVDPHVIKI 490
I EKR A K+ + P DS+ + P K+PVD ++ +
Sbjct: 32 IREKRQATEKEAMRPKDSKKSQRKARRPPIKRPVDMELLAV 72
>Z83218-7|CAB05685.2| 283|Caenorhabditis elegans Hypothetical
protein C31A11.3 protein.
Length = 283
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -2
Query: 408 LIIFFIFANLFSTIFLVFRC-LPIIMIYKYLYSK 310
++ + F NLF+ F +F C L II+++ LY K
Sbjct: 1 MLSIYGFCNLFAVFFAMFACFLNIILLFSILYLK 34
>Z83216-3|CAB05674.2| 232|Caenorhabditis elegans Hypothetical
protein C08F11.3 protein.
Length = 232
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -2
Query: 414 LGLIIFFIFANLFSTIFLVFRCLPII--MIYKYLYSKNLN 301
LG I FI + F T+F LP+ M ++Y Y K++N
Sbjct: 82 LGSIFMFIGPSEFLTVFCCILFLPVTLHMRFEYFYKKSVN 121
>AC006777-7|AAK72306.2| 367|Caenorhabditis elegans Seven tm
receptor protein 222 protein.
Length = 367
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 469 YRFLLLWFTPFAIFYPRVAGVDHFFHFCKSFLY 371
Y+FL+L+F+ F IFY V + FH + Y
Sbjct: 44 YKFLMLYFSFFEIFYGIVVALTSPFHHTQYATY 76
>Z81553-7|CAB04496.4| 797|Caenorhabditis elegans Hypothetical
protein F56H6.7 protein.
Length = 797
Score = 28.3 bits (60), Expect = 7.7
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -1
Query: 691 FFQFSKDTISNIWYAFSIKTIHHI 620
+F S DT+ NIW +HH+
Sbjct: 584 YFLMSDDTVFNIWQRIDYSRVHHL 607
>AL132948-28|CAD31828.1| 263|Caenorhabditis elegans Hypothetical
protein Y39B6A.36 protein.
Length = 263
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = +2
Query: 305 RFLEYKYL*IIIMGKQRKTRKIVEKRFAKMKKMINPSDSRIKNSERSEPKKKKPVDPHVI 484
++++ K I+ + +KT K++EK K K + ++ IK+ ++ + K D V+
Sbjct: 138 KYMKMKLAHIVKNTQPKKTVKMIEKAAVKFKPVSVHAEDMIKSKQKKDGAKTYRADRDVL 197
Query: 485 K 487
+
Sbjct: 198 R 198
>AC006769-9|AAF60585.2| 779|Caenorhabditis elegans Hypothetical
protein Y45G12C.11 protein.
Length = 779
Score = 28.3 bits (60), Expect = 7.7
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -1
Query: 691 FFQFSKDTISNIWYAFSIKTIHHI 620
+F S DT+ NIW +HH+
Sbjct: 567 YFLMSDDTVFNIWQRIDYSRVHHL 590
>AC006645-2|AAF39844.2| 796|Caenorhabditis elegans Hypothetical
protein F56A4.6 protein.
Length = 796
Score = 28.3 bits (60), Expect = 7.7
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -1
Query: 691 FFQFSKDTISNIWYAFSIKTIHHI 620
+F S DT+ NIW +HH+
Sbjct: 584 YFLMSDDTVFNIWQRIDYSRVHHL 607
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,173,019
Number of Sequences: 27780
Number of extensions: 417641
Number of successful extensions: 1314
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1313
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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