Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_N10
         (880 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    25   0.92 
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    24   1.6  
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              24   2.1  
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              23   4.9  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   6.5  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              22   8.6  
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          22   8.6  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    22   8.6  

>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 25.0 bits (52), Expect = 0.92
 Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
 Frame = -3

Query: 317 IPKTLTSILIDTNRYSNDK--PYEQY 246
           IP TLT I +DTNR  + K  PY  +
Sbjct: 90  IPATLTYISLDTNRGGSPKLTPYPNW 115


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -2

Query: 375 STIFLVFRCLPIIMIYKYLYSKNLNFYFN*HKPIQ 271
           +TIF    C+P+I+I  Y YS+ ++   N  K ++
Sbjct: 213 ATIFTFSYCIPMILII-YYYSQIVSHVVNHEKALR 246


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 10/46 (21%), Positives = 21/46 (45%)
 Frame = +1

Query: 289 IKIEVKVFGIQIFINHYNGQTTKNEENSREKICKNEKNDQPQRLSD 426
           +K  V +FG  + +     +  K   ++ + +CK E     Q+ +D
Sbjct: 1   MKTIVLIFGFCVCVGALTIEELKTRLHTEQSVCKTETGIDQQKAND 46


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 328 INHYNGQTTKNEENSREKICKNEKNDQPQRL 420
           +   N  TT NEE  RE+  K + ++Q  RL
Sbjct: 70  VGFVNADTTFNEEKFRERTTKLD-SEQVNRL 99


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +3

Query: 54   RTCQKNVVLFINLD 95
            RTCQK VVL + LD
Sbjct: 1322 RTCQKAVVLSMLLD 1335


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +2

Query: 563 LIDTNFINFSIKNKLDIIQNMMD 631
           ++D N  NF+ KN  DI+Q ++D
Sbjct: 72  VVDENG-NFNEKNTRDIVQAVLD 93


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +2

Query: 452 KKKKPVDPHVIKIREVPQT 508
           +K  P+ PH   +  +PQT
Sbjct: 99  RKLPPLHPHTAMVTHLPQT 117


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 5/16 (31%), Positives = 12/16 (75%)
 Frame = -1

Query: 478 MRIYRFLLLWFTPFAI 431
           M++   +++W++PF I
Sbjct: 276 MKLVGIIIMWYSPFGI 291


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 241,888
Number of Sequences: 438
Number of extensions: 5934
Number of successful extensions: 21
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)