Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_N08
(999 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 126 9e-28
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 95 3e-18
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 74 7e-12
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 66 2e-09
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 4e-09
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 62 3e-08
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 4e-07
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.005
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 42 0.025
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.057
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 40 0.100
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.100
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 36 1.2
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 6.6
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 6.6
UniRef50_Q4RMS4 Cluster: Chromosome 3 SCAF15018, whole genome sh... 33 8.7
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 33 8.7
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 126 bits (304), Expect = 9e-28
Identities = 54/57 (94%), Positives = 54/57 (94%)
Frame = +1
Query: 661 FPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIXHAVGISXRCRSXAPSWAVCTNP 831
FPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLI HAVGIS RCRS APSWAVCTNP
Sbjct: 48 FPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNP 104
Score = 70.5 bits (165), Expect = 6e-11
Identities = 35/44 (79%), Positives = 36/44 (81%)
Frame = +3
Query: 525 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDT 656
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDT
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDT 45
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 94.7 bits (225), Expect = 3e-18
Identities = 57/99 (57%), Positives = 62/99 (62%)
Frame = +3
Query: 357 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 536
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 537 GTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKD 653
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKD 112
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 73.7 bits (173), Expect = 7e-12
Identities = 34/37 (91%), Positives = 35/37 (94%)
Frame = +3
Query: 681 VRSPVPTLPLTGYLSAFLPSGSVALSHXSRCRYLXSV 791
+RSPVPTLPLTGYLSAFLPSGSVALSH SRCRYL SV
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 65.7 bits (153), Expect = 2e-09
Identities = 31/38 (81%), Positives = 33/38 (86%)
Frame = +3
Query: 543 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDT 656
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDT
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDT 81
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 4e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -2
Query: 533 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 420
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 61.7 bits (143), Expect = 3e-08
Identities = 33/67 (49%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = -1
Query: 831 GVRAHSPAWSXRPTPX*DTYSVXYEKAPRFPKGERRTGIR-*AAGSEQESARGSFQGKRL 655
GVRA+SPAWS RP P DT SV YEKAPRFPKG++ + G + + G+ K
Sbjct: 27 GVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSGKRQGRNRRAHEGAAGEKSP 86
Query: 654 YLYSPVG 634
SPVG
Sbjct: 87 ASLSPVG 93
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 4e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +3
Query: 333 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 500
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.005
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +2
Query: 452 HSKAVIRLSTESGDNAGKNM 511
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 41.9 bits (94), Expect = 0.025
Identities = 27/63 (42%), Positives = 32/63 (50%)
Frame = +1
Query: 643 TIKIQAFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIXHAVGISXRCRSXAPSWAVC 822
T+ ++ PL A SC+ P PPFSL + GIS RCRS APSWAV
Sbjct: 36 TVSDESLPL-ALSCS---NPAVSRIPVPPFSLAGSVALSHSSHSGISARCRSFAPSWAVS 91
Query: 823 TNP 831
NP
Sbjct: 92 KNP 94
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.057
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 331 SALMNRPTRGERRFAYW 381
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 39.9 bits (89), Expect = 0.100
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = +3
Query: 432 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 605
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 606 IDAQVRGGETRQDYKDTGVSP 668
I Q + +T+ +YK T P
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFP 102
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.100
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 403 ERGSGRAPNTQTASPRALADSLMQ 332
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 36.3 bits (80), Expect = 1.2
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -1
Query: 831 GVRAHSPAWSXRPTP 787
GVRAHSPAWS RPTP
Sbjct: 27 GVRAHSPAWSERPTP 41
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 6.6
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -2
Query: 542 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 420
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 6.6
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 214 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 381
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
>UniRef50_Q4RMS4 Cluster: Chromosome 3 SCAF15018, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 3
SCAF15018, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 754
Score = 33.5 bits (73), Expect = 8.7
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +3
Query: 468 YGYP-QNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQD 644
+G P + QGI+ ERT + +P + PR W S+ P + +++GG+ R
Sbjct: 613 HGVPGELQGIS-ERTLLELTRGKP-LLSHPRAWFVSLDGKPAAQVRHSIIELQGGQRRPS 670
Query: 645 YKDTGVSPG 671
DT + G
Sbjct: 671 SNDTSLDSG 679
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 33.5 bits (73), Expect = 8.7
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1
Query: 831 GVRAHSPAWSXRPTPX*DT 775
GV A+SPAWS RPTP DT
Sbjct: 27 GVLAYSPAWSERPTPSRDT 45
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 769,586,467
Number of Sequences: 1657284
Number of extensions: 15087113
Number of successful extensions: 42357
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 40456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42332
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 94306056537
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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