Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_N06
(1011 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 35 0.021
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.26
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.26
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.34
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 30 0.60
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 29 0.79
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 1.0
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 5.5
SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces ... 26 7.3
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 26 9.7
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 26 9.7
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 34.7 bits (76), Expect = 0.021
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 3/51 (5%)
Frame = -3
Query: 889 PXXPPXPXXPXGATXPXRXRPPXPXXPXPSPXEPX---RXAPPXPVXXXPP 746
P P P P P PP P P PSP APP P PP
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
Score = 32.3 bits (70), Expect = 0.11
Identities = 17/55 (30%), Positives = 20/55 (36%), Gaps = 2/55 (3%)
Frame = -3
Query: 904 PXPXPPXXPPXPXX--PXGATXPXRXRPPXPXXPXPSPXEPXRXAPPXPVXXXPP 746
P P P PP P P ++ P +P P PS PP P PP
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
Score = 28.7 bits (61), Expect = 1.4
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Frame = -3
Query: 871 PXXPXGATXPXRXRPPXPXXPXPS-PXEPXRXAPPXPVXXXPPRXXXXXPP 722
P P T RPP P PS P APP P PP PP
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIP-SKAPPIPSSLPPP 174
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.1 bits (67), Expect = 0.26
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Frame = -2
Query: 890 PXXPPXPXXXXXXXPXXPAPPXXPXXXPP-XPPXAXPXXP 774
P PP P P PP P PP PP A P P
Sbjct: 401 PALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLP 440
Score = 28.3 bits (60), Expect = 1.8
Identities = 16/61 (26%), Positives = 19/61 (31%)
Frame = -2
Query: 881 PPXPXXXXXXXPXXPAPPXXPXXXPPXPPXAXPXXPPXPGXRXXTXAXXXRPAXXGXXPX 702
PP P P PP PP PP + P P + A PA P
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPG 397
Query: 701 K 699
+
Sbjct: 398 R 398
Score = 28.3 bits (60), Expect = 1.8
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 836 APPXXPXXXPPXPPXAXPXXPPXP 765
APP P PP P P PP P
Sbjct: 427 APPSLPPSAPPSLPMGAPAAPPLP 450
Score = 27.5 bits (58), Expect = 3.2
Identities = 20/67 (29%), Positives = 21/67 (31%), Gaps = 6/67 (8%)
Frame = -3
Query: 904 PXPXPPXXPPXPXXPXGATXPXRXRPPXPXXPXPS-----PXEP-XRXAPPXPVXXXPPR 743
P P PP P G PP P P + P P R APP P P
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPS 371
Query: 742 XXXXXPP 722
PP
Sbjct: 372 TGRQPPP 378
Score = 27.5 bits (58), Expect = 3.2
Identities = 18/57 (31%), Positives = 19/57 (33%), Gaps = 8/57 (14%)
Frame = -3
Query: 910 AXPXPXPPXXPPXPXXPXGATXPXRXRPPXP--------XXPXPSPXEPXRXAPPXP 764
A P PP P P + P R P P P P P P R AP P
Sbjct: 348 AGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALP 404
Score = 27.1 bits (57), Expect = 4.2
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -2
Query: 890 PXXPPXPXXXXXXXPXXPAPPXXPXXXPPXPPXAXPXXPPXP 765
P PP P P P P PP PP A P PP P
Sbjct: 444 PAAPPLPPSA----PIAPPLPAGMPAAPPLPP-AAPAPPPAP 480
Score = 26.6 bits (56), Expect = 5.5
Identities = 20/77 (25%), Positives = 21/77 (27%), Gaps = 3/77 (3%)
Frame = -3
Query: 1009 RRPXPPXTPPPXXXXXXXXXXXXXXXXXXXXXTAXPXPXPPXXPPXPXXPXG--ATXPXR 836
R PP PP P PP P P P G A P
Sbjct: 411 RTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLP 470
Query: 835 XRPPXPXX-PXPSPXEP 788
P P P P+P P
Sbjct: 471 PAAPAPPPAPAPAPAAP 487
Score = 26.2 bits (55), Expect = 7.3
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = -3
Query: 892 PPXXPPXPXXPXGATXPXRXRPPXPXXPXPSPXEPXRXAPP 770
PP PP A + RPP P P P R PP
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPP----PPPPPSRRNRGKPP 326
Score = 26.2 bits (55), Expect = 7.3
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = -3
Query: 904 PXPXPPXXPPXPXXPXGATXPXRXRPPXPXXPXPSPXEPXRXAPPXP 764
P P PP PP + P P P P P APP P
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAP--IAPPLP 460
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.1 bits (67), Expect = 0.26
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 3/52 (5%)
Frame = -3
Query: 892 PPXXPPXPXXPXGATXPXRXRPPXP---XXPXPSPXEPXRXAPPXPVXXXPP 746
PP PP P A P PP P P P P A P P PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 30.7 bits (66), Expect = 0.34
Identities = 19/59 (32%), Positives = 21/59 (35%), Gaps = 4/59 (6%)
Frame = -3
Query: 910 AXPXPXPPXXPPXPXXPXGATXPXRXRPPXPXXPXPS----PXEPXRXAPPXPVXXXPP 746
A P P P PP P A + P P PS +P APP PV P
Sbjct: 1082 APPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAP 1140
Score = 30.3 bits (65), Expect = 0.45
Identities = 23/66 (34%), Positives = 24/66 (36%), Gaps = 3/66 (4%)
Frame = -3
Query: 910 AXPXPXPPXXPPXPXXPXGATXPXRXRP-PXPXXPXPSPXEPXRXAP-PXPVXXXP-PRX 740
A P P P PP P GA P P P P PS P P P P P P+
Sbjct: 1040 APPVPIPTSTPPVPKSSSGA--PSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKP 1097
Query: 739 XXXXPP 722
PP
Sbjct: 1098 SVAAPP 1103
Score = 29.5 bits (63), Expect = 0.79
Identities = 17/55 (30%), Positives = 18/55 (32%)
Frame = -3
Query: 910 AXPXPXPPXXPPXPXXPXGATXPXRXRPPXPXXPXPSPXEPXRXAPPXPVXXXPP 746
A P P P P P GA + P P PS P P V PP
Sbjct: 1139 APPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP 1193
Score = 29.5 bits (63), Expect = 0.79
Identities = 18/63 (28%), Positives = 19/63 (30%)
Frame = -3
Query: 910 AXPXPXPPXXPPXPXXPXGATXPXRXRPPXPXXPXPSPXEPXRXAPPXPVXXXPPRXXXX 731
A P P P PP P A P P P P P PP P+
Sbjct: 1149 APPVPAPSGAPPVPKPSVAA--PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVG 1206
Query: 730 XPP 722
PP
Sbjct: 1207 VPP 1209
Score = 27.9 bits (59), Expect = 2.4
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 4/51 (7%)
Frame = -3
Query: 904 PXPXPPXXPPXPXXPXGA--TXPXRXRPPXPXXP--XPSPXEPXRXAPPXP 764
P P P PP P G P PP P P P APP P
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVP 1240
Score = 27.5 bits (58), Expect = 3.2
Identities = 18/59 (30%), Positives = 20/59 (33%), Gaps = 4/59 (6%)
Frame = -3
Query: 910 AXPXPXPPXXPPXPXXPXGATXPXRXRPPXPXXPXPS----PXEPXRXAPPXPVXXXPP 746
A P P P P P GA + P P PS +P APP P P
Sbjct: 1101 APPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAP 1159
Score = 27.1 bits (57), Expect = 4.2
Identities = 17/63 (26%), Positives = 17/63 (26%)
Frame = -3
Query: 910 AXPXPXPPXXPPXPXXPXGATXPXRXRPPXPXXPXPSPXEPXRXAPPXPVXXXPPRXXXX 731
A P P P P P P PP P P P PP P
Sbjct: 1168 APPVPAPSSGIPPVPKPAAGVPPVP--PPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAG 1225
Query: 730 XPP 722
PP
Sbjct: 1226 LPP 1228
Score = 26.6 bits (56), Expect = 5.5
Identities = 17/53 (32%), Positives = 19/53 (35%), Gaps = 4/53 (7%)
Frame = -3
Query: 910 AXPXPXPPXXPPXPXXPXGATXPXRXRPPXPXXPXPS----PXEPXRXAPPXP 764
A P P P P P GA + P P PS +P APP P
Sbjct: 1120 APPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVP 1172
Score = 26.2 bits (55), Expect = 7.3
Identities = 16/55 (29%), Positives = 17/55 (30%), Gaps = 2/55 (3%)
Frame = -3
Query: 904 PXPXPPXXPPXPXXPXGATXPXRXRPPXPXXPXPSPXE--PXRXAPPXPVXXXPP 746
P PP P P PP P +P P APP PV P
Sbjct: 987 PKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAP 1041
Score = 25.8 bits (54), Expect = 9.7
Identities = 13/53 (24%), Positives = 16/53 (30%)
Frame = -3
Query: 904 PXPXPPXXPPXPXXPXGATXPXRXRPPXPXXPXPSPXEPXRXAPPXPVXXXPP 746
P P P P P PP P +P +P P+ PP
Sbjct: 961 PRPAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPP 1013
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.9 bits (64), Expect = 0.60
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = -2
Query: 881 PPXPXXXXXXXPXXPAPPXXPXXXPPXPPXAXPXXPPXP 765
P P P APP PP PP + P P P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAP 1721
Score = 29.5 bits (63), Expect = 0.79
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = -2
Query: 890 PXXPPXPXXXXXXXPXXPAPPXXPXXXPPXPPXAXPXXPPXPGXR 756
P PP P P P P PP P + P PG R
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNPGDR 1749
Score = 28.7 bits (61), Expect = 1.4
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = -3
Query: 898 PXPPXXPPXPXXPXGATXPXRXRPPXPXXPXP 803
P PP PP P P A P P P P
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 28.3 bits (60), Expect = 1.8
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Frame = -3
Query: 904 PXPXPPXXPPXPXXPX-GATXPXRXRPPXPXXPXPSPXEP 788
P P P PP P P A P PP P PS P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 27.9 bits (59), Expect = 2.4
Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
Frame = -3
Query: 892 PPXXPPXPXXPXGATXPXRXRPPXPXXP--XPSPXEPXRXAPPXP 764
P P P P + P PP P P P P P AP P
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 26.6 bits (56), Expect = 5.5
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -3
Query: 871 PXXPXGATXPXRXRPPXPXXPXPSPXEPXRXAPPXPVXXXPP 746
P P A P + + P P+P APP PV PP
Sbjct: 1448 PPAPMHAVAPVQPKAPGMVTNAPAPSSAP--APPAPVSQLPP 1487
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 29.5 bits (63), Expect = 0.79
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = -3
Query: 904 PXPXPPXXPPXPXXPXGATXPXRXRPPXPXXPXPSPXEPXRXAPPXPVXXXP 749
P P PP P P P PP P P P EP PP P P
Sbjct: 99 PEEPLPREPPLPNEPV-PEEPLPGEPPLPDEP--VPEEPLPGEPPLPNEPVP 147
Score = 27.1 bits (57), Expect = 4.2
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = -3
Query: 844 PXRXRPPXPXXPXPSPXEPXRXAPPXPVXXXPPRXXXXXPP 722
P PP P P P EP PP P P PP
Sbjct: 102 PLPREPPLPNEPVPE--EPLPGEPPLPDEPVPEEPLPGEPP 140
Score = 27.1 bits (57), Expect = 4.2
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = -2
Query: 890 PXXPPXPXXXXXXXPXXPAPPXXPXXXPPXPPXAXPXXPPXP 765
P PP P P P P P P P P PP P
Sbjct: 104 PREPPLP---NEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLP 142
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.1 bits (62), Expect = 1.0
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3
Query: 892 PPXXPPXPXXPXGATXPXRXRPPXP 818
PP PP P P G P + PP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 27.5 bits (58), Expect = 3.2
Identities = 12/27 (44%), Positives = 13/27 (48%), Gaps = 3/27 (11%)
Frame = -2
Query: 833 PPXXPXXXPPXP---PXAXPXXPPXPG 762
PP P PP P P + P PP PG
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPG 31
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 5.5
Identities = 17/56 (30%), Positives = 20/56 (35%)
Frame = -3
Query: 910 AXPXPXPPXXPPXPXXPXGATXPXRXRPPXPXXPXPSPXEPXRXAPPXPVXXXPPR 743
A P P PP PP P P +T + P P + PP PPR
Sbjct: 232 ADPLPAPP-PPPPPTLPPQSTNTSQL--PMPSRNVNNLGSQVNIPPPPATPSQPPR 284
>SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1888
Score = 26.2 bits (55), Expect = 7.3
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -1
Query: 276 LFCHALLNL*SENFHNYFIDFFNERSNIIIYVNSCKYINNV-TYLSEFIN 130
LF H L +L S H+Y + + ++ + +NS + + ++ Y S+F N
Sbjct: 1495 LFIHYLSSLLSSMQHSYETNGHSSDTHSLFVINSQRVVGDILQYCSQFAN 1544
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 25.8 bits (54), Expect = 9.7
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -1
Query: 222 IDFFNERSNIIIYVNSCKYINNVTYLSEFINIKQ-TSL 112
I F +R N++IY K+IN +L +N+ TSL
Sbjct: 1860 IRFGIQRPNLLIYDEDKKFINTEHFLGSKVNLNSVTSL 1897
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 25.8 bits (54), Expect = 9.7
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = +3
Query: 723 GGXXXXXRGGXXXTGXGGAXRXGSXGXGXGXXGXGGRXRXGXVAPXGXXGXGGXXGGXG 899
GG G G G R G+ G G G GGR G GG G G
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGG-ARGGRGGRGGARGGRGGSSGGRGGAKG 69
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,801,021
Number of Sequences: 5004
Number of extensions: 26543
Number of successful extensions: 238
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 173
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 525259918
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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