Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_N06
         (1011 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    28   0.39 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    28   0.51 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   1.6  
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    25   3.6  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 28.3 bits (60), Expect = 0.39
 Identities = 15/55 (27%), Positives = 16/55 (29%)
 Frame = -3

Query: 910 AXPXPXPPXXPPXPXXPXGATXPXRXRPPXPXXPXPSPXEPXRXAPPXPVXXXPP 746
           A P P  P  P     P     P    P  P  P P    P     P P+    P
Sbjct: 179 ARPNPGMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMP 233


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.9 bits (59), Expect = 0.51
 Identities = 21/53 (39%), Positives = 22/53 (41%)
 Frame = +3

Query: 747 GGXXXTGXGGAXRXGSXGXGXGXXGXGGRXRXGXVAPXGXXGXGGXXGGXGXG 905
           GG    G GG+   G  G G G  G GGR R          G GG  GG G G
Sbjct: 208 GGGAPGGGGGSS--GGPGPGGGGGG-GGRDRDHRDRDREREG-GGNGGGGGGG 256


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.2 bits (55), Expect = 1.6
 Identities = 12/31 (38%), Positives = 12/31 (38%)
 Frame = -3

Query: 910 AXPXPXPPXXPPXPXXPXGATXPXRXRPPXP 818
           A P P P   PP P        P   RPP P
Sbjct: 584 APPPPPPMGPPPSPLAGGPLGGPAGSRPPLP 614



 Score = 25.0 bits (52), Expect = 3.6
 Identities = 15/55 (27%), Positives = 17/55 (30%)
 Frame = -3

Query: 910 AXPXPXPPXXPPXPXXPXGATXPXRXRPPXPXXPXPSPXEPXRXAPPXPVXXXPP 746
           A P P PP  PP    P          P     P P+       APP  +    P
Sbjct: 579 AQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPPVTILVPYP 633



 Score = 23.8 bits (49), Expect = 8.3
 Identities = 12/39 (30%), Positives = 12/39 (30%)
 Frame = -2

Query: 881 PPXPXXXXXXXPXXPAPPXXPXXXPPXPPXAXPXXPPXP 765
           PP         P  PA    P   P  P    P  PP P
Sbjct: 550 PPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPPPP 588


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 25.0 bits (52), Expect = 3.6
 Identities = 12/44 (27%), Positives = 28/44 (63%)
 Frame = -1

Query: 306 VNVLFIVCNHLFCHALLNL*SENFHNYFIDFFNERSNIIIYVNS 175
           V ++F++CN      ++N+  E F++  I++  + SN+++ +NS
Sbjct: 316 VVIVFLLCN--LPAMMINI-VEAFYSLIIEYMVKVSNLLVTINS 356


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 475,533
Number of Sequences: 2352
Number of extensions: 6486
Number of successful extensions: 31
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 111407829
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)