Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_N05
(882 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC16C9.05 |||PHD finger containing protein|Schizosaccharomyces... 29 1.2
SPBC14F5.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 28 1.5
SPBP4H10.03 |oxa102|oxa1, oxa1-2, oxa1sp2|mitochondrial inner me... 28 2.0
SPBC776.17 |||rRNA processing protein Rrp7 |Schizosaccharomyces ... 28 2.0
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 2.7
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 27 2.7
SPAC19B12.08 |||peptidase family C54|Schizosaccharomyces pombe|c... 27 2.7
SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|c... 27 2.7
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 27 4.7
SPBC25B2.07c |mug164||microtubule-associated protein|Schizosacch... 27 4.7
SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit ... 26 6.2
SPAC19A8.12 |dcp2||mRNA decapping complex subunit Dcp2|Schizosac... 26 6.2
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 26 8.2
SPBC13G1.08c |ash2||Ash2-trithorax family protein|Schizosaccharo... 26 8.2
>SPAC16C9.05 |||PHD finger containing protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 404
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 359 HHRNCQ*HKEKPQHFSLRIKNMR*TKN 279
+H+NC+ H +K H S+ K MR KN
Sbjct: 264 YHKNCKEHAKKCSHDSIGKKGMRVPKN 290
>SPBC14F5.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 515
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 441 DAHCDNVQHQTDDPSTSSSLHSLGLPRTPSKLPIAQRKTSTF 316
D+ C+N++ T+++ SL P+TP KL I + F
Sbjct: 259 DSSCENIRILGFKAETNAATISLFAPKTPEKLQITLSSSDVF 300
>SPBP4H10.03 |oxa102|oxa1, oxa1-2, oxa1sp2|mitochondrial inner
membrane translocase Oxa102|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 409
Score = 27.9 bits (59), Expect = 2.0
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -1
Query: 396 TSSSLHSLGLPRTPSKLPIAQRKTSTF 316
+S+ H LGLP PS +P+ + +F
Sbjct: 311 SSTIRHKLGLPEVPSAMPVPNAQNESF 337
>SPBC776.17 |||rRNA processing protein Rrp7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 254
Score = 27.9 bits (59), Expect = 2.0
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +3
Query: 435 EHHNKQFDHDAFLGEDQAKTFDQLSPEE--SKRRLGEIADKIDSDQDGFITLV 587
E +++QF + L E +++ +E KRRL A K D+DGF+T+V
Sbjct: 136 ESYDRQFVNPRVLAESVDSYMKRVTKKEIAEKRRL--FAMKNQPDEDGFVTVV 186
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.5 bits (58), Expect = 2.7
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = +3
Query: 369 VPTNEETKRLMDHLSDAEHYRNEHHNKQFDHDAFLGEDQAKTFDQLSPEESKRRLGEIAD 548
V E + R+ LSD +H F ED ++DQ SPE ++ R I+
Sbjct: 1061 VRLEELSTRVSKMLSDINEV--DHTIASLSLKLFQAEDTKNSYDQTSPEATQERNRTISS 1118
Query: 549 KI 554
K+
Sbjct: 1119 KL 1120
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 27.5 bits (58), Expect = 2.7
Identities = 18/92 (19%), Positives = 39/92 (42%)
Frame = +3
Query: 471 LGEDQAKTFDQLSPEESKRRLGEIADKIDSDQDGFITLVELKDWIRYTQKRYIDEDVERH 650
+GE + D + K + + +I +G L E + +++ Q ++R
Sbjct: 72 IGEFELALCDAKQSDRIKPDVPKTQSRIRQAYEGLSILNEAEVYLKNKQAGLALNALDRL 131
Query: 651 WRQQNPNNEEFVTWEAYRKNVYGFMDDMDEKE 746
R+ + + ++W + VY F +DMD +
Sbjct: 132 QRRIDSTTQPPMSWMYLKAQVYIFQNDMDRAQ 163
>SPAC19B12.08 |||peptidase family C54|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -1
Query: 465 RHDQTACY-DAHCDNVQHQTDDPSTSSSLHSLGLPR 361
R +Q Y D HC + H T P++ + HS L R
Sbjct: 223 RQNQYFFYLDPHCTHFAHTTTQPASEETFHSATLRR 258
>SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 27.5 bits (58), Expect = 2.7
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +3
Query: 390 KRLMDHLSDAEHYRNEHHNKQFDHDAFLGEDQAK---TFDQLSPEESKRRLGEIADKI 554
+RL +HL +++ +H NK+ D + E++ K ++ PE K+ G +K+
Sbjct: 179 QRLAEHLENSKKTILQHDNKEEDKEIHSEENETKDEIKSEKKEPEIKKQEGGSSTEKV 236
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 26.6 bits (56), Expect = 4.7
Identities = 13/69 (18%), Positives = 33/69 (47%)
Frame = +3
Query: 501 QLSPEESKRRLGEIADKIDSDQDGFITLVELKDWIRYTQKRYIDEDVERHWRQQNPNNEE 680
++ +++ + E D D +G+IT+ EL + +R E+V R+ + + +
Sbjct: 77 KMKDTDNEEEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDGDG 136
Query: 681 FVTWEAYRK 707
+ +E + +
Sbjct: 137 VINYEEFSR 145
>SPBC25B2.07c |mug164||microtubule-associated
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -1
Query: 696 PPKSRTLRY*GSAVSNVFPHPHRCIASEYSGSNLSTQREL*NHPGL 559
P +SR + + S + H H +S +S L+T +E+ N P L
Sbjct: 417 PSRSRATIHERPSSSILHRHAHSLTSSSFSTKTLATTKEIQNSPTL 462
>SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit
Bgs2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1894
Score = 26.2 bits (55), Expect = 6.2
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 253 LRRYFLPPVFFVQRMFLILRLKC*GFSLCYWQFRWCSR 366
++R+F +Q +FL LK G +L +W +W SR
Sbjct: 1717 IQRFFFK---IIQVLFLTRELKHDGTNLAWWTGKWYSR 1751
>SPAC19A8.12 |dcp2||mRNA decapping complex subunit
Dcp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 26.2 bits (55), Expect = 6.2
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1
Query: 423 VQHQTDDPSTSSSLHSLGLPRTP 355
V HQ P TS+S+ S GL +TP
Sbjct: 413 VYHQVFYPPTSTSVSSYGLGKTP 435
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 25.8 bits (54), Expect = 8.2
Identities = 12/59 (20%), Positives = 28/59 (47%)
Frame = +3
Query: 498 DQLSPEESKRRLGEIADKIDSDQDGFITLVELKDWIRYTQKRYIDEDVERHWRQQNPNN 674
++L ES+ + D D G+I + D+++ ++ D +V+ ++ +P N
Sbjct: 69 NKLRETESEEEYIKAFRVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQLMVQEADPTN 127
>SPBC13G1.08c |ash2||Ash2-trithorax family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 652
Score = 25.8 bits (54), Expect = 8.2
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 639 VERHWRQQNPNNEEFVTWEA 698
+E HW+ P+ E+ TW+A
Sbjct: 159 IEEHWQLLCPDREKVQTWQA 178
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,477,332
Number of Sequences: 5004
Number of extensions: 74087
Number of successful extensions: 272
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 272
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 442483990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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