Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_N05
(882 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0217 + 1647319-1648327,1648462-1648577,1648650-1648817,164... 36 0.057
11_01_0216 + 1693889-1694897,1695034-1695149,1695222-1695389,169... 36 0.057
08_01_0626 - 5445676-5446687,5447099-5447430 36 0.057
01_01_1156 - 9194477-9194485,9194801-9195156,9197783-9197858 35 0.075
07_03_1738 - 29141829-29141989,29142112-29142343,29142751-291427... 35 0.099
05_05_0309 - 23987669-23988042,23989485-23989560 35 0.099
03_02_0817 + 11492699-11492774,11493605-11493978 35 0.099
01_01_1223 + 9886709-9886784,9887566-9887935,9888028-9888097 35 0.099
01_06_1085 + 34414353-34414428,34416038-34416407,34416534-34416651 34 0.13
03_05_1090 + 30313176-30313292,30314162-30314236,30314938-303151... 34 0.17
08_01_0505 - 4379722-4380795,4380868-4381008,4381099-4381270,438... 32 0.53
11_06_0418 - 23317077-23317343,23317614-23317787,23317886-233179... 32 0.70
11_06_0212 - 21319441-21319498,21319737-21319867,21319944-213200... 31 0.93
05_05_0315 - 24030695-24030787,24030896-24030995,24031120-240312... 31 0.93
12_02_1027 + 25496311-25496811 31 1.2
03_02_0773 + 11063556-11064077 31 1.2
06_03_0691 + 23552437-23552914,23555168-23555953,23556045-235561... 31 1.6
04_04_0786 - 28052981-28053040,28053123-28053222,28053447-280535... 31 1.6
12_01_0119 + 905916-907277,907737-907774,908269-908492,909411-90... 30 2.8
02_01_0763 - 5665010-5665202,5665285-5665375,5665460-5666245,566... 30 2.8
12_02_0667 + 21682386-21682944,21683042-21683201,21683419-216834... 29 4.9
03_06_0239 - 32578231-32578353,32578431-32578655,32579081-325792... 29 4.9
11_01_0043 + 328272-328753,329233-329298,330082-330253,330357-33... 28 8.6
08_01_0327 - 2942640-2943456,2944386-2944515,2944679-2944811 28 8.6
03_06_0454 + 34044351-34044499,34045495-34045510,34045640-340458... 28 8.6
01_06_1078 + 34378985-34380064,34380155-34380283,34380362-343804... 28 8.6
>12_01_0217 +
1647319-1648327,1648462-1648577,1648650-1648817,
1648911-1649038,1649121-1649220,1649329-1649433
Length = 541
Score = 35.5 bits (78), Expect = 0.057
Identities = 21/78 (26%), Positives = 37/78 (47%)
Frame = +3
Query: 513 EESKRRLGEIADKIDSDQDGFITLVELKDWIRYTQKRYIDEDVERHWRQQNPNNEEFVTW 692
EE + L E+ ID D G ITL ELK+ + ++ D ++E+ + + + +
Sbjct: 383 EEEIKGLKEMFKNIDKDNSGTITLEELKNGLAKQGTKFSDNEIEQLMEAADADGNGIIDY 442
Query: 693 EAYRKNVYGFMDDMDEKE 746
E + M+ MD +E
Sbjct: 443 EEF-VTATVHMNKMDREE 459
>11_01_0216 +
1693889-1694897,1695034-1695149,1695222-1695389,
1695482-1695609,1695692-1695791,1696124-1696168
Length = 521
Score = 35.5 bits (78), Expect = 0.057
Identities = 21/78 (26%), Positives = 37/78 (47%)
Frame = +3
Query: 513 EESKRRLGEIADKIDSDQDGFITLVELKDWIRYTQKRYIDEDVERHWRQQNPNNEEFVTW 692
EE + L E+ ID D G ITL ELK+ + ++ D ++E+ + + + +
Sbjct: 383 EEEIKGLKEMFKNIDKDNSGTITLEELKNGLAKQGTKFSDNEIEQLMEAADADGNGIIDY 442
Query: 693 EAYRKNVYGFMDDMDEKE 746
E + M+ MD +E
Sbjct: 443 EEF-VTATVHMNKMDREE 459
>08_01_0626 - 5445676-5446687,5447099-5447430
Length = 447
Score = 35.5 bits (78), Expect = 0.057
Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 5/136 (3%)
Frame = +3
Query: 384 ETKRLMDH--LSDAEHYRNEHHNKQFDHDAFLGEDQAKTFDQLSPEESKRRLGEIADKID 557
E + M+H + D + E ++ + D FL ED+ D+ EE + + E D+ +
Sbjct: 184 EMEHEMEHEMMHDDDDDEEEEEEEEEEEDEFLYEDENVDDDEDEGEEDE-EIEEDEDENN 242
Query: 558 SDQDGFITLVELKDWIRYTQ---KRYIDEDVERHWRQQNPNNEEFVTWEAYRKNVYGFMD 728
D D + E +D + DED++ +N NEE WE RKN F
Sbjct: 243 DDDDEEEEMEEDEDLDEDKNDVVEEEEDEDMDEGEDDENETNEE---WEV-RKNKDAFAI 298
Query: 729 DMDEKELKLLTVKASH 776
+ EL+LL + ++
Sbjct: 299 AENMPELRLLQISGNN 314
>01_01_1156 - 9194477-9194485,9194801-9195156,9197783-9197858
Length = 146
Score = 35.1 bits (77), Expect = 0.075
Identities = 17/70 (24%), Positives = 37/70 (52%)
Frame = +3
Query: 501 QLSPEESKRRLGEIADKIDSDQDGFITLVELKDWIRYTQKRYIDEDVERHWRQQNPNNEE 680
++ +S+ L E D DQ+GFI+ EL+ + ++ DE+V+ R+ + + +
Sbjct: 76 KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDG 135
Query: 681 FVTWEAYRKN 710
+ +E + K+
Sbjct: 136 QINYEEFVKD 145
>07_03_1738 -
29141829-29141989,29142112-29142343,29142751-29142792,
29143312-29143410,29143575-29143667,29143742-29143876,
29144251-29144290,29144475-29144844,29146575-29146650
Length = 415
Score = 34.7 bits (76), Expect = 0.099
Identities = 17/69 (24%), Positives = 36/69 (52%)
Frame = +3
Query: 501 QLSPEESKRRLGEIADKIDSDQDGFITLVELKDWIRYTQKRYIDEDVERHWRQQNPNNEE 680
++ +S+ L E D DQ+GFI+ EL+ + ++ DE+V+ R+ + + +
Sbjct: 76 KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDG 135
Query: 681 FVTWEAYRK 707
+ +E + K
Sbjct: 136 QINYEEFVK 144
>05_05_0309 - 23987669-23988042,23989485-23989560
Length = 149
Score = 34.7 bits (76), Expect = 0.099
Identities = 17/69 (24%), Positives = 36/69 (52%)
Frame = +3
Query: 501 QLSPEESKRRLGEIADKIDSDQDGFITLVELKDWIRYTQKRYIDEDVERHWRQQNPNNEE 680
++ +S+ L E D DQ+GFI+ EL+ + ++ DE+V+ R+ + + +
Sbjct: 76 KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDG 135
Query: 681 FVTWEAYRK 707
+ +E + K
Sbjct: 136 QINYEEFVK 144
>03_02_0817 + 11492699-11492774,11493605-11493978
Length = 149
Score = 34.7 bits (76), Expect = 0.099
Identities = 17/69 (24%), Positives = 36/69 (52%)
Frame = +3
Query: 501 QLSPEESKRRLGEIADKIDSDQDGFITLVELKDWIRYTQKRYIDEDVERHWRQQNPNNEE 680
++ +S+ L E D DQ+GFI+ EL+ + ++ DE+V+ R+ + + +
Sbjct: 76 KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDG 135
Query: 681 FVTWEAYRK 707
+ +E + K
Sbjct: 136 QINYEEFVK 144
>01_01_1223 + 9886709-9886784,9887566-9887935,9888028-9888097
Length = 171
Score = 34.7 bits (76), Expect = 0.099
Identities = 17/69 (24%), Positives = 36/69 (52%)
Frame = +3
Query: 501 QLSPEESKRRLGEIADKIDSDQDGFITLVELKDWIRYTQKRYIDEDVERHWRQQNPNNEE 680
++ +S+ L E D DQ+GFI+ EL+ + ++ DE+VE R+ + + +
Sbjct: 76 KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVEEMIREADVDGDG 135
Query: 681 FVTWEAYRK 707
+ ++ + K
Sbjct: 136 QINYDEFVK 144
>01_06_1085 + 34414353-34414428,34416038-34416407,34416534-34416651
Length = 187
Score = 34.3 bits (75), Expect = 0.13
Identities = 30/120 (25%), Positives = 50/120 (41%)
Frame = +3
Query: 348 ISMVFAGVPTNEETKRLMDHLSDAEHYRNEHHNKQFDHDAFLGEDQAKTFDQLSPEESKR 527
+ V + N L D +S+ + N + FLG K D+ S EE K
Sbjct: 33 LGTVMRSLGQNPTEAELQDMISEVD----TDSNGNIEFKEFLGLMARKLRDKDSEEELK- 87
Query: 528 RLGEIADKIDSDQDGFITLVELKDWIRYTQKRYIDEDVERHWRQQNPNNEEFVTWEAYRK 707
E D DQ+GFI+ EL+ + +R DE+V + + + + + +E + K
Sbjct: 88 ---EAFRVFDKDQNGFISATELRHVMANIGERLTDEEVGEMISEADVDGDGQINYEEFVK 144
>03_05_1090 +
30313176-30313292,30314162-30314236,30314938-30315181,
30315701-30315787,30315832-30315995,30316587-30316689,
30317751-30317908,30318025-30318105,30318192-30318344
Length = 393
Score = 33.9 bits (74), Expect = 0.17
Identities = 16/62 (25%), Positives = 34/62 (54%)
Frame = +3
Query: 516 ESKRRLGEIADKIDSDQDGFITLVELKDWIRYTQKRYIDEDVERHWRQQNPNNEEFVTWE 695
+ L E + +D DQ+GFI+ EL+ + ++ DE+VE+ R+ + + + V ++
Sbjct: 319 DGDEELKEAFEVLDKDQNGFISPTELRTVMTNLGEKMTDEEVEQMIREADTDGDGQVNYD 378
Query: 696 AY 701
+
Sbjct: 379 EF 380
>08_01_0505 - 4379722-4380795,4380868-4381008,4381099-4381270,
4381944-4382047,4382127-4382259,4384477-4384653,
4385164-4385309,4385536-4385625,4385703-4385915,
4386090-4386182,4386743-4386937,4387018-4387110,
4387924-4388019,4388556-4388985,4389424-4390091,
4392074-4392271,4392690-4393407,4394036-4394181
Length = 1628
Score = 32.3 bits (70), Expect = 0.53
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -1
Query: 480 PLPKRRHDQTACYDAHCDNVQHQTDDPSTSSSLHSLGLPRTP 355
PLPK +H++T A +H +D + + L SL LP P
Sbjct: 1283 PLPKEKHEETLAASA----AEHPDEDYESDTGLESLDLPEVP 1320
>11_06_0418 -
23317077-23317343,23317614-23317787,23317886-23317971,
23318125-23318244,23318338-23318368,23318457-23318532,
23318672-23318759,23318877-23318938,23319041-23319117,
23319890-23319992,23320237-23320298,23321116-23321289,
23322160-23322405
Length = 521
Score = 31.9 bits (69), Expect = 0.70
Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +3
Query: 705 KNVYGFMDDMDEKELKLLTVKASHTQIFRRGIGRXWTYADADQNDALNRTE-FAAFLXPE 881
K+ +GF+D D + + V + Q+F + I W YA + D F L PE
Sbjct: 195 KSSFGFVDYYDRRSAAIAIVSLNGRQLFGQPIKVNWAYASTQREDTSGHFNIFVGDLCPE 254
>11_06_0212 -
21319441-21319498,21319737-21319867,21319944-21320033,
21320141-21320298,21320646-21320721
Length = 170
Score = 31.5 bits (68), Expect = 0.93
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Frame = +3
Query: 432 NEHHNKQFDHDAFLGEDQAKTF--DQLSPEESKRRLGEIADKIDSDQDGFITLVELKDWI 605
+E N + D FL + K + D+ EE R+ I DK D +GFI+ EL +
Sbjct: 57 DEDGNGTIEFDEFLAIMKKKLYENDKGDDEEELRKAFRIFDK---DDNGFISRNELSMVM 113
Query: 606 RYTQKRYIDEDVERHWRQQNPNNEEFVTWEAYRK 707
+ +++++ + + NN+ V +E +++
Sbjct: 114 ASLGEEMTEDEIDDMMKAADSNNDGQVDYEEFKR 147
>05_05_0315 -
24030695-24030787,24030896-24030995,24031120-24031247,
24031350-24031517,24031626-24031741,24031773-24031896,
24032085-24032254,24032255-24032999
Length = 547
Score = 31.5 bits (68), Expect = 0.93
Identities = 32/138 (23%), Positives = 60/138 (43%), Gaps = 18/138 (13%)
Frame = +3
Query: 513 EESKRRLGEIADKIDSDQDGFITLVELKDWIRYTQKRYIDEDVERHWRQQNPNN------ 674
EE R L E+ +DSD G IT+ EL+ + + + +V++ + +
Sbjct: 393 EEEIRGLKEMFKSMDSDNSGTITVDELRKGLAKKGTKLTEAEVQQLMEAADADGNGTIDY 452
Query: 675 EEFVTWEAY------RKNVYGFMDDMDEKELKLLTVKASHTQIFRRGI--GRXW----TY 818
EEF+T + +++Y D+ +T++ + +G+ GR +
Sbjct: 453 EEFITATMHMNRMDREEHLYTAFQYFDKDNSGYITIEELEQALREKGLMDGREIKDIISE 512
Query: 819 ADADQNDALNRTEFAAFL 872
DAD + +N TEF A +
Sbjct: 513 VDADNDGRINYTEFVAMM 530
>12_02_1027 + 25496311-25496811
Length = 166
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = +3
Query: 507 SPEESKRRLGEIADKIDSDQDGFITLVELKDWIRYTQKRYIDEDVERHWRQQNPNNEEFV 686
S + + L E D DQDG I+ EL+ + ++ DE+VE+ R+ + + + V
Sbjct: 93 SGDAADEELREAFKVFDKDQDGLISAAELRHVMISLGEKLTDEEVEQMIREADLDGDGQV 152
Query: 687 TWEAY 701
++ +
Sbjct: 153 NFDEF 157
>03_02_0773 + 11063556-11064077
Length = 173
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Frame = +3
Query: 546 DKIDSDQDGFITLVELKDWI---RYTQKRYIDEDVERHWRQQNPNNEEFVTWEAYRK 707
D +D+D+DG I+ +LK + T +R+ DED+ + +N+ FV ++ + +
Sbjct: 26 DVLDADRDGRISREDLKSFYASGAATSERFDDEDIAAMIAAADVDNDGFVQYDEFER 82
>06_03_0691 +
23552437-23552914,23555168-23555953,23556045-23556135,
23556214-23556406
Length = 515
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/93 (21%), Positives = 36/93 (38%)
Frame = +3
Query: 381 EETKRLMDHLSDAEHYRNEHHNKQFDHDAFLGEDQAKTFDQLSPEESKRRLGEIADKIDS 560
++ +R MD + E YR + L E+ + E L + +D
Sbjct: 119 DDFRRYMDD-KELELYRIFQAIDVEHNGCILPEELWDALVKAGIEIDDEELARFVEHVDK 177
Query: 561 DQDGFITLVELKDWIRYTQKRYIDEDVERHWRQ 659
D +G IT E +D++ E++ HW +
Sbjct: 178 DNNGIITFEEWRDFLLLYPNEVTIENIYHHWER 210
>04_04_0786 -
28052981-28053040,28053123-28053222,28053447-28053574,
28053654-28053821,28053901-28054013,28054135-28054287,
28054385-28054528,28054794-28055529
Length = 533
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +3
Query: 498 DQLSPEESKRRLGEIADKIDSDQDGFITLVELKDWIRYTQKRYIDEDVER 647
+ LSPEE K L ++ + +D+D+ G IT+ ELK + R + +V++
Sbjct: 386 ENLSPEEIKG-LKQMFNNMDTDRSGTITVEELKVGLTKLGSRISEAEVQK 434
>12_01_0119 +
905916-907277,907737-907774,908269-908492,909411-909637,
909733-909980,910275-910557,910707-911135
Length = 936
Score = 29.9 bits (64), Expect = 2.8
Identities = 22/104 (21%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Frame = +3
Query: 450 QFDHDAFLGEDQAKTFDQLSPEESKRRLGEIADKIDSDQDGFITLVELKDWIRYTQKRYI 629
Q D+D+++ D + P ++ + D+ D ++ GF +V TQ +
Sbjct: 180 QLDNDSYMNTDT-----DIDPMNARLDQWDSDDQEDVEESGFDEIVNTM-----TQHQQQ 229
Query: 630 DEDVERHWRQQNPNNEEFVTWEA---YRKNVYGFMDDMDEKELK 752
D++ ++ + + W R NV +DDM+E E++
Sbjct: 230 SHDIQLSGLSEDESEDGVWNWSVSVRQRANVTNLLDDMEEPEMR 273
>02_01_0763 -
5665010-5665202,5665285-5665375,5665460-5666245,
5667745-5668225
Length = 516
Score = 29.9 bits (64), Expect = 2.8
Identities = 20/93 (21%), Positives = 36/93 (38%)
Frame = +3
Query: 381 EETKRLMDHLSDAEHYRNEHHNKQFDHDAFLGEDQAKTFDQLSPEESKRRLGEIADKIDS 560
++ +R MD + E YR + L E+ + E L + +D
Sbjct: 120 DDFRRYMDD-KELELYRIFQAIDVEHNGCILPEELWHALVKAGIEIDDEELARFVEHVDK 178
Query: 561 DQDGFITLVELKDWIRYTQKRYIDEDVERHWRQ 659
D +G IT E +D++ E++ HW +
Sbjct: 179 DNNGIITFEEWRDFLLLYPHEATIENIYHHWER 211
>12_02_0667 +
21682386-21682944,21683042-21683201,21683419-21683467,
21683570-21683683,21683794-21684294,21684594-21684980,
21685074-21685172,21685380-21685478,21685817-21685890,
21686387-21687023
Length = 892
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 471 LGEDQAKTF-DQLSPEESKRRLGEIADKIDSDQDGFITLVELKDWIRYT 614
L +DQ + F +QLS +L D +D + DG IT ELK+ + T
Sbjct: 213 LTKDQLREFWEQLSDPGFDAKLQTFFDMVDKNADGQITEEELKEVLTLT 261
>03_06_0239 -
32578231-32578353,32578431-32578655,32579081-32579248,
32579331-32579446,32579540-32579692,32579779-32579922,
32580775-32581576
Length = 576
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = +3
Query: 447 KQFDHDAFLGEDQAKTFDQLSPEESKRRLGEIADKIDSDQDGFITLVELKDWIRYTQKRY 626
KQF L + + + EE L E+ +D+D G ITL ELK ++
Sbjct: 391 KQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKMLDTDNSGHITLEELKTGLQRVGANL 450
Query: 627 IDEDVE 644
+D +++
Sbjct: 451 MDSEID 456
>11_01_0043 +
328272-328753,329233-329298,330082-330253,330357-330565,
330779-330937,331279-331627
Length = 478
Score = 28.3 bits (60), Expect = 8.6
Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Frame = +3
Query: 318 MLRFFFVLLAISMVFAGVPTNEETKRLMDHLSDAEHYRNEHHNKQFDHDAFLGEDQAKTF 497
++ FF V+ ++S++F + ++ L+ A+H E KQ A +GE ++
Sbjct: 17 LVAFFIVVSSVSLLF------DRSQDAQAQLAVAQHQHQEVQLKQKPASAAVGEQKSVFV 70
Query: 498 DQLSPEESKRRL---GEIADKIDSDQDGFITLVELKDW 602
DQ S + ++ E+ D DG + E +W
Sbjct: 71 DQSSLRSQEAQVQWTSELQDVATDSGDGGVDGEEECNW 108
>08_01_0327 - 2942640-2943456,2944386-2944515,2944679-2944811
Length = 359
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3
Query: 369 VPTNEETKRLMDHLSDAEHYRNEHHNKQFDHD 464
+ EE +R + H H+ +EH N Q+D +
Sbjct: 291 IELEEEEQRQLGHHHHQHHHEHEHENHQWDEE 322
>03_06_0454 + 34044351-34044499,34045495-34045510,34045640-34045862,
34045969-34046092,34046168-34046294,34046821-34046882,
34046972-34048023,34048167-34048556,34048667-34052628,
34052710-34052796,34052885-34053004,34053096-34053152
Length = 2122
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -1
Query: 441 DAHCDNVQHQTDDPSTSSSLHSLGLPRTPSKLPIAQ 334
D N ++D+P +H LG+P P +L + Q
Sbjct: 1232 DDKAANSDLKSDEPFIDEKIHELGVPSVPMELEVEQ 1267
>01_06_1078 +
34378985-34380064,34380155-34380283,34380362-34380430,
34380536-34380588,34381309-34381421,34381565-34382132,
34382520-34382580,34382624-34382665
Length = 704
Score = 28.3 bits (60), Expect = 8.6
Identities = 26/89 (29%), Positives = 40/89 (44%)
Frame = +3
Query: 348 ISMVFAGVPTNEETKRLMDHLSDAEHYRNEHHNKQFDHDAFLGEDQAKTFDQLSPEESKR 527
+S+ F G E +L+ LS A + E + +FD D G D +FD ++ +
Sbjct: 219 LSIAFLGAEDLEMIYKLLHQLSLANTWELEQ-SPEFDED---GSD---SFDAVTLVQDTN 271
Query: 528 RLGEIADKIDSDQDGFITLVELKDWIRYT 614
L KI S DG I ++ W+ YT
Sbjct: 272 TLCLDVRKIISSTDGSIMEDDVFKWLFYT 300
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,581,705
Number of Sequences: 37544
Number of extensions: 443221
Number of successful extensions: 1273
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1272
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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