Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_N05
         (882 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    26   1.3  
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    25   4.0  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    24   7.1  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   9.3  
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    23   9.3  

>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = -1

Query: 486 PGPLPKRRHDQTACYDAHCDNVQHQTDDPSTSSSLHSLGLPRTPSKLPI 340
           P PLP+R   Q           Q + + P  S+S H++ LPR+ +   +
Sbjct: 181 PTPLPRRSSAQPQQQQQQQQRNQQEQEQPRASTS-HAVMLPRSEASTAV 228


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +1

Query: 400 WIICLMLNIIAMSIITSSLIMTPFWERTRPKLSINY 507
           WI  +++NI+A+  I  ++       R + + SINY
Sbjct: 84  WISGVVMNIVALIGILGNIFSMVILSRPQMRSSINY 119


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = -1

Query: 486 PGPLPKRRHDQTACYDAHCDNVQHQTDDPSTSSS 385
           P PLP+R   Q           QH+ + P  S+S
Sbjct: 205 PTPLPRRSSAQPQQQQQQQQRNQHEQEQPRASTS 238


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 11/44 (25%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -1

Query: 435 HCDNVQHQTDDPSTSSSLHSLGLPRTPSKLPIAQ-RKTSTF*PK 307
           HC  ++H  D   +S + ++L L      +P+ + ++TS   P+
Sbjct: 413 HCTMIRHDDDSNQSSGTCYTLYLEFLGGLVPLLKGKRTSKIRPE 456


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = +3

Query: 477 EDQAKTFDQLSPEESKRRLGEIADKIDSDQDGFITLVELK 596
           E+ AK   ++   ++ + +GE   K+   Q+G + L+ELK
Sbjct: 128 EELAKLLKEMKQSDALKSVGETISKVRRAQNGGM-LLELK 166


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 851,968
Number of Sequences: 2352
Number of extensions: 18352
Number of successful extensions: 275
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 275
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94680279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)