Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_N04
         (910 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      25   0.82 
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    24   1.4  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   7.6  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   7.6  

>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 25.0 bits (52), Expect = 0.82
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 623 TNVDHICYSLSCIPLPLPAYYLIG 552
           T V H+     C+P P+P++  IG
Sbjct: 44  TPVIHVLQYPGCVPKPIPSFACIG 67


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 769 NSAVSGFSFFKTSARWVPSMLDTKWT 692
           NSA+ G  FF  +  W P +++ KW+
Sbjct: 270 NSAIEGIIFFNLAKSW-PQLIE-KWS 293


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 264 EKFSFCIPTPNDGDILLDYSKNRINSDVF 350
           EK +   P P D ++   YSK  I + +F
Sbjct: 2   EKSTKIFPVPGDKNLHKSYSKMLILAQIF 30


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 264 EKFSFCIPTPNDGDILLDYSKNRINSDVF 350
           EK +   P P D ++   YSK  I + +F
Sbjct: 2   EKSTKIFPVPGDKNLHKSYSKMLILAQIF 30


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,144
Number of Sequences: 336
Number of extensions: 3176
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25341085
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)