Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_N04
(910 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0143 + 31962241-31962291,31962385-31962506,31962572-319626... 132 4e-31
06_01_1040 + 8163654-8163704,8163814-8163935,8164011-8164092,816... 129 3e-30
09_04_0439 - 17594131-17594271,17595018-17595100,17595199-175953... 66 3e-11
08_02_1017 - 23616244-23616381,23616471-23616537,23617160-236172... 61 1e-09
12_01_0722 + 6355972-6359031 38 0.011
12_01_0740 + 6646471-6649407 37 0.025
12_01_0741 + 6649988-6653065 32 0.55
12_01_0727 + 6446283-6449300 31 1.3
12_01_0731 - 6516894-6517473,6517485-6519574 31 1.7
12_01_0715 - 6230393-6231559,6233234-6234553 31 1.7
12_01_0736 + 6582371-6585370 30 2.2
12_01_0718 + 6339982-6342981 30 2.2
12_01_0686 - 5855216-5858263 30 2.2
01_01_0421 + 3181139-3184207 30 2.2
12_01_0708 - 6137865-6140909 29 3.9
03_06_0344 - 33276366-33276548,33277044-33277169,33277254-332773... 29 5.1
03_05_0911 + 28697654-28697698,28698170-28698278,28698352-286984... 29 5.1
05_06_0204 + 26354319-26356967 29 6.7
03_02_0933 - 12505196-12505286,12505759-12505814,12508780-125088... 29 6.7
01_01_0424 + 3200223-3200634,3200677-3200836,3200987-3201342,320... 29 6.7
>03_06_0143 +
31962241-31962291,31962385-31962506,31962572-31962671,
31962775-31962822,31963096-31963251,31963330-31963426,
31963525-31963567,31963970-31964037,31964139-31964223,
31964297-31964345,31964566-31964638,31964708-31964768,
31965417-31965483,31965709-31965762,31965854-31965982,
31966485-31966548,31966655-31966728,31966793-31966867,
31966972-31967040,31967759-31967848,31968014-31968121,
31968251-31968298
Length = 576
Score = 132 bits (319), Expect = 4e-31
Identities = 72/192 (37%), Positives = 117/192 (60%), Gaps = 7/192 (3%)
Frame = +3
Query: 231 LQLFQQDRERFEKFSFCIPTPNDGD-ILLDYSKNRINSDVFKLLLDLAKSRNVEQARDAM 407
L+ D ER + + C+ ++ + I LDYS+ R + + L LA++ +++ + M
Sbjct: 43 LRHLMHDVERCKAMTACLLIDSEYEGIYLDYSRQRATGETMEKLFKLAEAAKLKEKIEKM 102
Query: 408 FSGQKINFTEDRAVLHIALRNRQNKPILVNGKDVSTDVNAVLEHMKEFSDQVVSGQWKGY 587
F G KIN TE+R+VLH+ALR +++ I NG +V +V V + +K+FS+ SG W G
Sbjct: 103 FRGDKINSTENRSVLHVALRAPRDEVINSNGVNVVPEVWGVKDKIKQFSETFRSGSWVGA 162
Query: 588 TGKAITDVINIGIGGSDLGPLMVTEALK------PYANHLKVHFVSNIDGTHLAEVLKKL 749
TGKA+T+V+++GIGGS LGPL V AL+ A ++ F++N+D +A +K L
Sbjct: 163 TGKALTNVVSVGIGGSFLGPLFVHAALQTDPEAAESAKGRQLRFLANVDPVDVARSIKDL 222
Query: 750 NPETALFIIASR 785
+PET L ++ S+
Sbjct: 223 DPETTLVVVVSK 234
>06_01_1040 +
8163654-8163704,8163814-8163935,8164011-8164092,
8164166-8164213,8164516-8164671,8164747-8164843,
8164942-8164984,8165375-8165442,8165533-8165617,
8165698-8165746,8165968-8166040,8166119-8166179,
8167114-8167180,8167400-8167453,8167537-8167665,
8168192-8168255,8168366-8168439,8168523-8168576,
8168696-8168764,8169394-8169483,8169656-8169763,
8169876-8169923
Length = 563
Score = 129 bits (312), Expect = 3e-30
Identities = 67/166 (40%), Positives = 106/166 (63%), Gaps = 6/166 (3%)
Frame = +3
Query: 306 ILLDYSKNRINSDVFKLLLDLAKSRNVEQARDAMFSGQKINFTEDRAVLHIALRNRQNKP 485
I LDYS+ R + + L LA++ +++ + MFSG KIN TE+R+VLH+ALR +++
Sbjct: 63 IFLDYSRQRATGETMEKLFKLAEAAKLKEKIEKMFSGDKINSTENRSVLHVALRAPRDEV 122
Query: 486 ILVNGKDVSTDVNAVLEHMKEFSDQVVSGQWKGYTGKAITDVINIGIGGSDLGPLMVTEA 665
I +G +V +V V + +K+FS+ SG W G TGKA+T+V+++GIGGS LGPL V A
Sbjct: 123 IKSDGVNVVPEVWGVKDKIKQFSETFRSGSWVGATGKALTNVVSVGIGGSFLGPLFVHAA 182
Query: 666 LK------PYANHLKVHFVSNIDGTHLAEVLKKLNPETALFIIASR 785
L+ A ++ F++N+D +A +K L+PET L ++ S+
Sbjct: 183 LQTDPEAAESAKGRQLRFLANVDPVDVARSIKDLDPETTLVVVVSK 228
>09_04_0439 -
17594131-17594271,17595018-17595100,17595199-17595355,
17595438-17595576,17595668-17595720,17596150-17596257,
17596345-17596413,17596505-17596570,17596651-17596794,
17597372-17597455,17597539-17597637,17597753-17597875,
17598283-17598831
Length = 604
Score = 66.5 bits (155), Expect = 3e-11
Identities = 47/128 (36%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Frame = +3
Query: 414 GQKINFTEDRAVLHIALRNRQNKPILVNGKDVSTDVNAVLEHMKEFSDQVVSGQWKGYTG 593
G N E R V H LR+ P L + T + L+ + FS VVSG+ K +
Sbjct: 134 GAIANPDEGRMVGHYWLRD----PGLAPNSFLRTKIETTLDRILAFSQDVVSGKIKPPSS 189
Query: 594 KA--ITDVINIGIGGSDLGPLMVTEALKPYANHLKVHFVSNIDGTHLAEVLKKLNPETA- 764
A T +++IGIGGS LGP V+EAL P LK+ F+ N D + + +L PE A
Sbjct: 190 PAGRFTQILSIGIGGSALGPQFVSEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELAS 249
Query: 765 -LFIIASR 785
L I+ S+
Sbjct: 250 TLVIVISK 257
>08_02_1017 -
23616244-23616381,23616471-23616537,23617160-23617238,
23617330-23617486,23617581-23617719,23617820-23617872,
23618037-23618120,23618291-23618359,23618488-23618553,
23618657-23618800,23619331-23619414,23619498-23619596,
23620097-23620219,23620745-23621290
Length = 615
Score = 61.3 bits (142), Expect = 1e-09
Identities = 43/128 (33%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Frame = +3
Query: 414 GQKINFTEDRAVLHIALRNRQNKPILVNGKDVSTDVNAVLEHMKEFSDQVVSGQWKGYTG 593
G N E R V H LRN P L + + LE + F+ V+S + + +
Sbjct: 133 GAIANPDEGRMVGHYWLRN----PALAPNSFLRDKIETTLERILAFASDVISAKIRPPSS 188
Query: 594 KA--ITDVINIGIGGSDLGPLMVTEALKPYANHLKVHFVSNIDGTHLAEVLKKLNPETA- 764
A T +++IGIGGS LGP V EAL P L + F+ N D + + +L PE A
Sbjct: 189 PAGRFTQILSIGIGGSSLGPQFVAEALAPDNPPLMIRFIDNTDPAGIDHQIAQLGPELAS 248
Query: 765 -LFIIASR 785
L I+ S+
Sbjct: 249 TLVIVISK 256
>12_01_0722 + 6355972-6359031
Length = 1019
Score = 37.9 bits (84), Expect = 0.011
Identities = 27/77 (35%), Positives = 35/77 (45%)
Frame = +3
Query: 186 NYNNYYXVNSTKINMLQLFQQDRERFEKFSFCIPTPNDGDILLDYSKNRINSDVFKLLLD 365
++NN+ + S + L + D F F IP P G I LDYS NR +S
Sbjct: 570 SHNNFTSIGSNPLLPLYIEYFDLS-FNNFDGAIPVPQKGSITLDYSTNRFSSMPLNFSSY 628
Query: 366 LAKSRNVEQARDAMFSG 416
L KS V +A D SG
Sbjct: 629 L-KSTVVLKASDNSLSG 644
>12_01_0740 + 6646471-6649407
Length = 978
Score = 36.7 bits (81), Expect = 0.025
Identities = 26/77 (33%), Positives = 35/77 (45%)
Frame = +3
Query: 186 NYNNYYXVNSTKINMLQLFQQDRERFEKFSFCIPTPNDGDILLDYSKNRINSDVFKLLLD 365
++NN+ + S + L + D F F IP P G I LDYS NR +S
Sbjct: 529 SHNNFTSIGSNPLLPLYIEYFDLS-FNNFDGAIPVPQKGSITLDYSTNRFSSMPLNFSSY 587
Query: 366 LAKSRNVEQARDAMFSG 416
L K+ V +A D SG
Sbjct: 588 L-KNTVVLKASDNSLSG 603
>12_01_0741 + 6649988-6653065
Length = 1025
Score = 32.3 bits (70), Expect = 0.55
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 261 FEKFSFCIPTPNDGDILLDYSKNRINS 341
F F IP P G + LDYS NR +S
Sbjct: 587 FNNFEGTIPIPEQGSVTLDYSNNRFSS 613
>12_01_0727 + 6446283-6449300
Length = 1005
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 261 FEKFSFCIPTPNDGDILLDYSKNRINS 341
F IP P +G + LDYS NR +S
Sbjct: 580 FNNIEGAIPIPKEGSVTLDYSNNRFSS 606
>12_01_0731 - 6516894-6517473,6517485-6519574
Length = 889
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 261 FEKFSFCIPTPNDGDILLDYSKNRINS 341
F IP P +G + LDYS NR +S
Sbjct: 587 FNNIEGTIPIPKEGSVTLDYSNNRFSS 613
>12_01_0715 - 6230393-6231559,6233234-6234553
Length = 828
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 261 FEKFSFCIPTPNDGDILLDYSKNRINS 341
F IP P +G + LDYS NR +S
Sbjct: 502 FNNIEGVIPIPKEGSVTLDYSNNRFSS 528
>12_01_0736 + 6582371-6585370
Length = 999
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 261 FEKFSFCIPTPNDGDILLDYSKNRINS 341
F K IP P G I LDYS N+ +S
Sbjct: 575 FNKIEGVIPIPQKGSITLDYSNNQFSS 601
>12_01_0718 + 6339982-6342981
Length = 999
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 261 FEKFSFCIPTPNDGDILLDYSKNRINS 341
F K IP P G I LDYS N+ +S
Sbjct: 575 FNKIEGVIPIPQKGSITLDYSNNQFSS 601
>12_01_0686 - 5855216-5858263
Length = 1015
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/74 (25%), Positives = 34/74 (45%)
Frame = +3
Query: 186 NYNNYYXVNSTKINMLQLFQQDRERFEKFSFCIPTPNDGDILLDYSKNRINSDVFKLLLD 365
++NN+ + S + L + D F IP P +G LDYS N+ +S L
Sbjct: 568 SHNNFTSLGSDPLLPLHIEFLDLS-FNSIEGPIPIPQEGSSTLDYSSNQFSSIPLHYLTY 626
Query: 366 LAKSRNVEQARDAM 407
L ++ + +R+ +
Sbjct: 627 LGETLTFKASRNKL 640
>01_01_0421 + 3181139-3184207
Length = 1022
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 261 FEKFSFCIPTPNDGDILLDYSKNRINS 341
F KF IP P + +LDYS NR +S
Sbjct: 598 FNKFEGPIPLPQNSGTVLDYSNNRFSS 624
>12_01_0708 - 6137865-6140909
Length = 1014
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 186 NYNNYYXVNSTKINMLQLFQQDRERFEKFSFCIPTPNDGDILLDYSKNRINS 341
++NN + S + L++ D F IP P +G +LDYS N+ +S
Sbjct: 569 SHNNITSLGSDPLLPLEIDFFDLS-FNSIEGPIPVPQEGSTMLDYSSNQFSS 619
>03_06_0344 -
33276366-33276548,33277044-33277169,33277254-33277322,
33277401-33277505,33277595-33277633,33277717-33278016,
33278093-33278182,33278271-33278312,33278433-33278516,
33278762-33278947,33279218-33279403,33279663-33280025
Length = 590
Score = 29.1 bits (62), Expect = 5.1
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 340 VMFLSCSSISLRAEMLNKPEMPCSQV 417
V F SC+S+ AE+LN ++ CS +
Sbjct: 353 VFFSSCNSVKFHAELLNFLQIECSDI 378
>03_05_0911 +
28697654-28697698,28698170-28698278,28698352-28698433,
28698486-28698514,28699472-28699567,28699860-28699963,
28700071-28700201,28700276-28700369,28701666-28701721,
28702728-28702821
Length = 279
Score = 29.1 bits (62), Expect = 5.1
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = -3
Query: 365 IEEQLKNITVDTVLGIVK*DVSIVRCWDTEAELFEALPILLEKLEHI-----NFCAVYXV 201
+E+ L + + + G + D + C + ELF +P+L +EH+ N CAVY +
Sbjct: 94 LEDNLDDWLDEQLEGYLDDDYLVFDC-PGQIELFTHVPVLRNFVEHLKRKNFNVCAVYLL 152
Query: 200 IVVVISDMLRLV 165
+SD+ + +
Sbjct: 153 DSQFVSDVTKYI 164
>05_06_0204 + 26354319-26356967
Length = 882
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +3
Query: 165 NKTQHIRNYNN--YYXVNSTKINMLQLFQQDRERFEKFSFCIPTPN 296
N++ H+ NY + Y + + L Q+D R +KF + T N
Sbjct: 808 NESGHLLNYKSAEYQEIGGEPFKLFALLQEDSRRSDKFVLLVITDN 853
>03_02_0933 -
12505196-12505286,12505759-12505814,12508780-12508873,
12508949-12509079,12509187-12509290,12509585-12509680,
12510752-12510860,12511252-12511296
Length = 241
Score = 28.7 bits (61), Expect = 6.7
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = -3
Query: 365 IEEQLKNITVDTVLGIVK*DVSIVRCWDTEAELFEALPILLEKLEHI-----NFCAVYXV 201
+E+ L + + + G + D + C + ELF +P+L +EH+ N CAVY +
Sbjct: 57 LEDNLDDWLDEQLDGYLDDDYLVFDC-PGQIELFTHVPVLRNFVEHLKRKNFNVCAVYFL 115
Query: 200 IVVVISDMLRLV 165
+SD+ + +
Sbjct: 116 DSQFVSDVTKYI 127
>01_01_0424 +
3200223-3200634,3200677-3200836,3200987-3201342,
3201958-3203252
Length = 740
Score = 28.7 bits (61), Expect = 6.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 261 FEKFSFCIPTPNDGDILLDYSKNRINS 341
F F IP P + +LDYS NR +S
Sbjct: 316 FNMFEGTIPLPQNSRFVLDYSNNRFSS 342
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,557,611
Number of Sequences: 37544
Number of extensions: 339210
Number of successful extensions: 874
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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