Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_N04
         (910 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   2.4  
AY735443-1|AAU08018.1|  163|Anopheles gambiae bursicon protein.        25   3.2  
AY735442-1|AAU08017.1|  163|Anopheles gambiae bursicon protein.        25   3.2  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +3

Query: 429 FTEDRAVLHIALRNRQNKPILVNGKD-VSTDVNAVLEHMKEFSD 557
           + E+ A    ALR+   KPIL NG+D V   + + L+  +E++D
Sbjct: 486 YKEELARADQALRSMAGKPIL-NGRDSVRKVLESFLQRGREYAD 528


>AY735443-1|AAU08018.1|  163|Anopheles gambiae bursicon protein.
          Length = 163

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 623 TNVDHICYSLSCIPLPLPAYYLIG 552
           T V H+     C+P P+P++  IG
Sbjct: 42  TPVIHVLQYPGCVPKPIPSFACIG 65


>AY735442-1|AAU08017.1|  163|Anopheles gambiae bursicon protein.
          Length = 163

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 623 TNVDHICYSLSCIPLPLPAYYLIG 552
           T V H+     C+P P+P++  IG
Sbjct: 42  TPVIHVLQYPGCVPKPIPSFACIG 65


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 701,395
Number of Sequences: 2352
Number of extensions: 12767
Number of successful extensions: 33
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 98401338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)