Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_N04
(910 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110500-9|CAE54920.1| 586|Caenorhabditis elegans Hypothetical ... 269 2e-72
AL110500-8|CAB60430.1| 551|Caenorhabditis elegans Hypothetical ... 269 2e-72
Z92838-3|CAB07409.2| 440|Caenorhabditis elegans Hypothetical pr... 39 0.006
Z83125-8|CAB05623.1| 507|Caenorhabditis elegans Hypothetical pr... 33 0.37
L23646-2|AAK67235.1| 304|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z50740-2|CAA90608.1| 383|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z81095-1|CAB03158.1| 667|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z70286-4|CAA94291.2| 533|Caenorhabditis elegans Hypothetical pr... 29 6.1
AJ582070-1|CAE46540.1| 533|Caenorhabditis elegans flavin monoox... 29 6.1
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 28 8.0
>AL110500-9|CAE54920.1| 586|Caenorhabditis elegans Hypothetical
protein Y87G2A.8b protein.
Length = 586
Score = 269 bits (659), Expect = 2e-72
Identities = 128/192 (66%), Positives = 154/192 (80%)
Frame = +3
Query: 210 NSTKINMLQLFQQDRERFEKFSFCIPTPNDGDILLDYSKNRINSDVFKLLLDLAKSRNVE 389
N +L+LF++D RFEKF+ TP DGD L D+SKNRI + F+LL+ LAKSR VE
Sbjct: 54 NEKDAQLLELFEKDPARFEKFTRLFATP-DGDFLFDFSKNRITDESFQLLMRLAKSRGVE 112
Query: 390 QARDAMFSGQKINFTEDRAVLHIALRNRQNKPILVNGKDVSTDVNAVLEHMKEFSDQVVS 569
++R+AMFS +KINFTE+RAVLH+ALRNR N+PILV+GKDV DVN VL HMKEF ++++S
Sbjct: 113 ESRNAMFSAEKINFTENRAVLHVALRNRANRPILVDGKDVMPDVNRVLAHMKEFCNEIIS 172
Query: 570 GQWKGYTGKAITDVINIGIGGSDLGPLMVTEALKPYANHLKVHFVSNIDGTHLAEVLKKL 749
G W GYTGK ITDV+NIGIGGSDLGPLMVTE+LK Y VHFVSN+DGTH+AEV KKL
Sbjct: 173 GSWTGYTGKKITDVVNIGIGGSDLGPLMVTESLKNYQIGPNVHFVSNVDGTHVAEVTKKL 232
Query: 750 NPETALFIIASR 785
N ET LFIIAS+
Sbjct: 233 NAETTLFIIASK 244
>AL110500-8|CAB60430.1| 551|Caenorhabditis elegans Hypothetical
protein Y87G2A.8a protein.
Length = 551
Score = 269 bits (659), Expect = 2e-72
Identities = 128/192 (66%), Positives = 154/192 (80%)
Frame = +3
Query: 210 NSTKINMLQLFQQDRERFEKFSFCIPTPNDGDILLDYSKNRINSDVFKLLLDLAKSRNVE 389
N +L+LF++D RFEKF+ TP DGD L D+SKNRI + F+LL+ LAKSR VE
Sbjct: 19 NEKDAQLLELFEKDPARFEKFTRLFATP-DGDFLFDFSKNRITDESFQLLMRLAKSRGVE 77
Query: 390 QARDAMFSGQKINFTEDRAVLHIALRNRQNKPILVNGKDVSTDVNAVLEHMKEFSDQVVS 569
++R+AMFS +KINFTE+RAVLH+ALRNR N+PILV+GKDV DVN VL HMKEF ++++S
Sbjct: 78 ESRNAMFSAEKINFTENRAVLHVALRNRANRPILVDGKDVMPDVNRVLAHMKEFCNEIIS 137
Query: 570 GQWKGYTGKAITDVINIGIGGSDLGPLMVTEALKPYANHLKVHFVSNIDGTHLAEVLKKL 749
G W GYTGK ITDV+NIGIGGSDLGPLMVTE+LK Y VHFVSN+DGTH+AEV KKL
Sbjct: 138 GSWTGYTGKKITDVVNIGIGGSDLGPLMVTESLKNYQIGPNVHFVSNVDGTHVAEVTKKL 197
Query: 750 NPETALFIIASR 785
N ET LFIIAS+
Sbjct: 198 NAETTLFIIASK 209
>Z92838-3|CAB07409.2| 440|Caenorhabditis elegans Hypothetical
protein T03D8.4 protein.
Length = 440
Score = 38.7 bits (86), Expect = 0.006
Identities = 48/184 (26%), Positives = 82/184 (44%), Gaps = 12/184 (6%)
Frame = +3
Query: 168 KTQHIRNYNNYYXV--NSTKINML----QLFQQDRERFEKF---SFCIPTPNDGDILLDY 320
KTQ +RN NN+Y N K+ ML F+ DRER + F S P P L+ Y
Sbjct: 44 KTQLLRNLNNFYPSINNGEKLEMLTGRKPEFEDDRERNQNFDGNSVTEPFPTQYPTLIPY 103
Query: 321 SKNRINSDVFKLLLDLAKSRNVEQARDAMFSGQKINFTED-RAVLHIALRNRQNKPILVN 497
+ R ++ +L L A + + ++ + S QK++ D R L+ A +NR ++
Sbjct: 104 A--RESNPEEELQLATAPTSKI-RSEGRITSEQKMDSIRDFRMKLYKAFKNRPKLSRMIR 160
Query: 498 GKDVS--TDVNAVLEHMKEFSDQVVSGQWKGYTGKAITDVINIGIGGSDLGPLMVTEALK 671
+V+ ++N + + + Q++ + + T N G G L+ L+
Sbjct: 161 KSNVNDVVEMNDGFPTIMDKNRQIILSRTEPNWQSLNTRKPNQTYGRDQNGNLIPLLGLE 220
Query: 672 PYAN 683
P AN
Sbjct: 221 PAAN 224
>Z83125-8|CAB05623.1| 507|Caenorhabditis elegans Hypothetical
protein T15D6.10 protein.
Length = 507
Score = 32.7 bits (71), Expect = 0.37
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 551 EFLHVF*YRIDISADILTVHQDRLVLTVTQSYMQYCPVFCEVY 423
E H F Y SA H+D++V+T+T M + ++C Y
Sbjct: 113 EHFHPFLYHTKPSAMSAFAHKDQIVVTLTSENMMHATMYCRYY 155
>L23646-2|AAK67235.1| 304|Caenorhabditis elegans Hypothetical
protein F44E2.10 protein.
Length = 304
Score = 31.5 bits (68), Expect = 0.86
Identities = 13/44 (29%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Frame = +3
Query: 201 YXVNSTKINMLQLFQQDRERFEKFSFCIPTPNDGD--ILLDYSK 326
Y N+ +++ ++++Q +R E FS+ +P DG+ I+L +S+
Sbjct: 79 YSFNNAEVDDMEIYQTERWSKESFSYDVPISEDGEYVIILKFSE 122
>Z50740-2|CAA90608.1| 383|Caenorhabditis elegans Hypothetical
protein F31B12.3 protein.
Length = 383
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/59 (28%), Positives = 33/59 (55%)
Frame = +3
Query: 396 RDAMFSGQKINFTEDRAVLHIALRNRQNKPILVNGKDVSTDVNAVLEHMKEFSDQVVSG 572
R+ MFS IN+ D+ + ++ + K I++ + T++N + + +F DQV+SG
Sbjct: 113 RNVMFS---INYLIDQKLFDKVVKPKTGKNIVIYKVKLLTNLNLSNKILFQFQDQVISG 168
>Z81095-1|CAB03158.1| 667|Caenorhabditis elegans Hypothetical
protein F59F4.1 protein.
Length = 667
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +3
Query: 618 IGIGGSDLGPLMVTEALKPYANHLKVHFVSNIDGTHLAEVLKKLNPETALFI 773
+GI G+D G L+ + P L + N DGT++A KL T +F+
Sbjct: 240 LGINGNDNGFLLFDKVRIPRKALLMRYAKVNPDGTYIAPAHSKLGYGTMVFV 291
>Z70286-4|CAA94291.2| 533|Caenorhabditis elegans Hypothetical
protein K08C7.2 protein.
Length = 533
Score = 28.7 bits (61), Expect = 6.1
Identities = 26/111 (23%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Frame = +3
Query: 309 LLDYSKNRINSDVFKLLLDLAKSRNVEQARDAMFSGQ-KINFTEDRAVLHIALRNRQNKP 485
LL+YSK+ ++ K + K ++++ D +G+ K+N+T+D+ H A+ +
Sbjct: 93 LLNYSKHY---ELEKHIKFNHKVNSIDRNEDYEKTGKWKVNYTDDKGATHDAV---FDGV 146
Query: 486 ILVNGKDVSTDVNAVLEHMKEFSDQVV-SGQWKGYTGKAITDVINIGIGGS 635
+L +G + + +F +++ S +K + G V+ +GIG S
Sbjct: 147 MLCSGHHTTPNWPQKFRGQDDFKGRIIHSHSYKDHRGYEDKVVVVVGIGNS 197
>AJ582070-1|CAE46540.1| 533|Caenorhabditis elegans flavin
monooxygenase protein.
Length = 533
Score = 28.7 bits (61), Expect = 6.1
Identities = 26/111 (23%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Frame = +3
Query: 309 LLDYSKNRINSDVFKLLLDLAKSRNVEQARDAMFSGQ-KINFTEDRAVLHIALRNRQNKP 485
LL+YSK+ ++ K + K ++++ D +G+ K+N+T+D+ H A+ +
Sbjct: 93 LLNYSKHY---ELEKHIKFNHKVNSIDRNEDYEKTGKWKVNYTDDKGATHDAV---FDGV 146
Query: 486 ILVNGKDVSTDVNAVLEHMKEFSDQVV-SGQWKGYTGKAITDVINIGIGGS 635
+L +G + + +F +++ S +K + G V+ +GIG S
Sbjct: 147 MLCSGHHTTPNWPQKFRGQDDFKGRIIHSHSYKDHRGYEDKVVVVVGIGNS 197
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 28.3 bits (60), Expect = 8.0
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 340 VMFLSCSSISLRAEMLNKPEMPCSQV 417
V F SC+S+ E+LN ++PC +
Sbjct: 319 VFFSSCNSVKFHHELLNYIDIPCMSI 344
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,064,486
Number of Sequences: 27780
Number of extensions: 296343
Number of successful extensions: 812
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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