Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_N02
         (934 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0142 - 940421-940701,941262-941574                               33   0.32 
06_03_1153 - 28047125-28047751                                         31   1.7  
04_03_0660 + 18463011-18463322,18463424-18463516,18464500-184646...    31   1.7  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    29   7.0  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   7.0  
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863...    24   8.2  

>05_01_0142 - 940421-940701,941262-941574
          Length = 197

 Score = 33.1 bits (72), Expect = 0.32
 Identities = 13/31 (41%), Positives = 14/31 (45%)
 Frame = +3

Query: 465 PPPXXFFVPPPXKXPPXXGXXXXGXXXPPXG 557
           PPP   + PPP   PP  G    G   PP G
Sbjct: 55  PPPPGAYPPPPGAYPPQHGYPQPGGYPPPGG 85


>06_03_1153 - 28047125-28047751
          Length = 208

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +2

Query: 464 PPPXXFFCXPPXKXPPP 514
           PPP   FC PP   PPP
Sbjct: 9   PPPPAIFCPPPLSPPPP 25


>04_03_0660 +
           18463011-18463322,18463424-18463516,18464500-18464607,
           18464892-18465044,18465256-18465354,18465443-18465571,
           18465987-18466166,18466208-18466246,18466247-18466363,
           18466445-18466609
          Length = 464

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 17/54 (31%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
 Frame = +2

Query: 224 HXPX-LXXXXFXXPPKXXKNXAXXPKIPPXNPPP*XGXKXXPXPPKXXXTXGGN 382
           H P  L    +  PP   ++ A  P  PP  PPP       P PP      GG+
Sbjct: 25  HVPDWLNSPIWSAPPPPARHRAPSPPRPPPPPPPPTQPAPPPPPPARSGGGGGS 78


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = +2

Query: 260 PPKXXKNXAXXPKIPPXNPPP*XGXKXXPXPP 355
           PP    N +  P  PP  PPP    +  P PP
Sbjct: 623 PPPPLPNHSVLPPPPPPPPPPSLPNRLVPPPP 654


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 13/32 (40%), Positives = 13/32 (40%)
 Frame = +2

Query: 260 PPKXXKNXAXXPKIPPXNPPP*XGXKXXPXPP 355
           PP      A  P  PP  PPP    K  P PP
Sbjct: 326 PPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPP 357


>03_02_0455 -
           8630543-8630893,8630994-8631068,8631149-8631223,
           8631332-8631397,8631891-8631967,8632659-8633070
          Length = 351

 Score = 24.2 bits (50), Expect(2) = 8.2
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = +2

Query: 260 PPKXXKNXAXXPKIPPXNPPP*XGXKXXPXPP 355
           PP         P+IPP   PP  G +  P PP
Sbjct: 282 PPPPNAPMGMPPRIPP---PPVGGTQPPPPPP 310



 Score = 22.6 bits (46), Expect(2) = 8.2
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = +2

Query: 464 PPPXXFFCXPPXKXPPP 514
           PPP      PP   PPP
Sbjct: 307 PPPPPLANGPPRSIPPP 323


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,735,016
Number of Sequences: 37544
Number of extensions: 371180
Number of successful extensions: 1109
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 979
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2670960720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)