Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_N02
(934 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.22
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.22
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.22
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 29 6.3
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 29 6.3
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 29 6.3
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 28 8.3
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 28 8.3
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 28 8.3
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 8.3
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.5 bits (73), Expect = 0.22
Identities = 22/73 (30%), Positives = 22/73 (30%)
Frame = +2
Query: 302 PPXNPPP*XGXKXXPXPPKXXXTXGGNPXXXXXXGXXXPXXF*KKKXXXXXXLXPPPXXF 481
PP PP G P PP G P G P PPP
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP--------ISGGPPPPPPPPG 766
Query: 482 FCXPPXKXPPPXG 520
C PP PPP G
Sbjct: 767 GCPPPPPPPPPGG 779
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.5 bits (73), Expect = 0.22
Identities = 22/73 (30%), Positives = 22/73 (30%)
Frame = +2
Query: 302 PPXNPPP*XGXKXXPXPPKXXXTXGGNPXXXXXXGXXXPXXF*KKKXXXXXXLXPPPXXF 481
PP PP G P PP G P G P PPP
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP--------ISGGPPPPPPPPG 766
Query: 482 FCXPPXKXPPPXG 520
C PP PPP G
Sbjct: 767 GCPPPPPPPPPGG 779
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.5 bits (73), Expect = 0.22
Identities = 22/73 (30%), Positives = 22/73 (30%)
Frame = +2
Query: 302 PPXNPPP*XGXKXXPXPPKXXXTXGGNPXXXXXXGXXXPXXF*KKKXXXXXXLXPPPXXF 481
PP PP G P PP G P G P PPP
Sbjct: 298 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP--------ISGGPPPPPPPPG 349
Query: 482 FCXPPXKXPPPXG 520
C PP PPP G
Sbjct: 350 GCPPPPPPPPPGG 362
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +3
Query: 468 PPXXFFVPPPXKXPPXXGXXXXGXXXPPXGXXG 566
PP + PPP PP G G P G G
Sbjct: 58 PPIGYGAPPPPPPPPAFGGLGGGAAYPGAGAGG 90
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +3
Query: 468 PPXXFFVPPPXKXPPXXGXXXXGXXXPPXGXXG 566
PP + PPP PP G G P G G
Sbjct: 58 PPIGYGAPPPPPPPPAFGGLGGGAAYPGAGAGG 90
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +3
Query: 468 PPXXFFVPPPXKXPPXXGXXXXGXXXPPXGXXG 566
PP + PPP PP G G P G G
Sbjct: 58 PPIGYGAPPPPPPPPAFGGLGGGAAYPGAGAGG 90
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/48 (29%), Positives = 15/48 (31%)
Frame = +3
Query: 414 PPXFFKKKKXXXXXXSXPPPXXFFVPPPXKXPPXXGXXXXGXXXPPXG 557
PP F P P +PPP PP G PP G
Sbjct: 58 PPMPFSASSLVSLKYGQPMPHHMGMPPPGMGPPPFMPPPIGMPPPPLG 105
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/48 (29%), Positives = 15/48 (31%)
Frame = +3
Query: 414 PPXFFKKKKXXXXXXSXPPPXXFFVPPPXKXPPXXGXXXXGXXXPPXG 557
PP F P P +PPP PP G PP G
Sbjct: 81 PPMPFSASSLVSLKYGQPMPHHMGMPPPGMGPPPFMPPPIGMPPPPLG 128
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/48 (29%), Positives = 15/48 (31%)
Frame = +3
Query: 414 PPXFFKKKKXXXXXXSXPPPXXFFVPPPXKXPPXXGXXXXGXXXPPXG 557
PP F P P +PPP PP G PP G
Sbjct: 331 PPMPFSASSLVSLKYGQPMPHHMGMPPPGMGPPPFMPPPIGMPPPPLG 378
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 260 PPKXXKNXAXXPKIPPXNPPP*XGXKXXPXPP 355
PP +N + P PP PPP G P PP
Sbjct: 565 PPPLPQNLSGAPP-PPPPPPPMLGGPPPPPPP 595
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,987,422
Number of Sequences: 27780
Number of extensions: 211283
Number of successful extensions: 612
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 535
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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